Difference between revisions of "Ec-05 000950"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.151-RXN 2.4.1.151-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** galactosyltransfera...")
 
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-7616 CPD-7616] == * smiles: ** C(C1(C=C(C(=CC=1)O)O))=O * inchi key: ** InChIKey=IBGBGRVKPA...")
Line 1: Line 1:
[[Category:Reaction]]
+
[[Category:Metabolite]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.151-RXN 2.4.1.151-RXN] ==
+
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-7616 CPD-7616] ==
* direction:
+
* smiles:
** LEFT-TO-RIGHT
+
** C(C1(C=C(C(=CC=1)O)O))=O
 +
* inchi key:
 +
** InChIKey=IBGBGRVKPALMCQ-UHFFFAOYSA-N
 
* common name:
 
* common name:
** galactosyltransferase
+
** protocatechualdehyde
* ec number:
+
* molecular weight:
** [http://enzyme.expasy.org/EC/2.4.1.87 EC-2.4.1.87]
+
** 138.123   
 
* Synonym(s):
 
* Synonym(s):
 +
** 3,4-dihydroxybenzaldehyde
 +
** 3,4-dihydroxybenzyl aldehyde
 +
** rancinamycin IV
  
== Reaction Formula ==
+
== Reaction(s) known to consume the compound ==
* With identifiers:
+
== Reaction(s) known to produce the compound ==
** 1 [[B-Gal-14-NacGlc-R]][c] '''+''' 1 [[CPD-14553]][c] '''=>''' 1 [[ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[UDP]][c]
+
* [[RXN-8872]]
* With common name(s):
+
== Reaction(s) of unknown directionality ==
** 1 β-D-galactosyl-(1→4)-N-acetyl-β-D-glucosaminyl-R[c] '''+''' 1 UDP-α-D-galactose[c] '''=>''' 1 α-D-galactosyl-(1,3)-β-D-galactosyl-(1,4)-N-acetyl-D-glucosaminyl-R[c] '''+''' 1 H+[c] '''+''' 1 UDP[c]
+
 
+
== Genes associated with this reaction  ==
+
Genes have been associated with this reaction based on different elements listed below.
+
* [[Ec-01_006680]]
+
** ESILICULOSUS_GENOME
+
***GO-TERM
+
* [[Ec-14_005280]]
+
** ESILICULOSUS_GENOME
+
***GO-TERM
+
* [[Ec-00_004510]]
+
** ESILICULOSUS_GENOME
+
***GO-TERM
+
* [[Ec-24_000030]]
+
** ESILICULOSUS_GENOME
+
***GO-TERM
+
* [[Ec-08_004370]]
+
** ESILICULOSUS_GENOME
+
***GO-TERM
+
* [[Ec-03_002280]]
+
** ESILICULOSUS_GENOME
+
***GO-TERM
+
* [[Ec-26_000190]]
+
** ESILICULOSUS_GENOME
+
***GO-TERM
+
== Pathways  ==
+
* [[PWY-7434]], terminal O-glycans residues modification: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7434 PWY-7434]
+
** '''10''' reactions found over '''10''' reactions in the full pathway
+
== Reconstruction information  ==
+
* [[annotation]]:
+
** [[pathwaytools]]:
+
*** [[esiliculosus_genome]]
+
 
== External links  ==
 
== External links  ==
* RHEA:
+
* PUBCHEM:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13013 13013]
+
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=8768 8768]
* LIGAND-RXN:
+
* CHEMSPIDER:
** [http://www.genome.jp/dbget-bin/www_bget?R02791 R02791]
+
** [http://www.chemspider.com/Chemical-Structure.8438.html 8438]
* UNIPROT:
+
* CHEBI:
** [http://www.uniprot.org/uniprot/Q28855 Q28855]
+
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=50205 50205]
{{#set: direction=LEFT-TO-RIGHT}}
+
* LIGAND-CPD:
{{#set: common name=galactosyltransferase}}
+
** [http://www.genome.jp/dbget-bin/www_bget?C16700 C16700]
{{#set: ec number=EC-2.4.1.87}}
+
* HMDB : HMDB59965
{{#set: gene associated=Ec-01_006680|Ec-14_005280|Ec-00_004510|Ec-24_000030|Ec-08_004370|Ec-03_002280|Ec-26_000190}}
+
{{#set: smiles=C(C1(C=C(C(=CC=1)O)O))=O}}
{{#set: in pathway=PWY-7434}}
+
{{#set: inchi key=InChIKey=IBGBGRVKPALMCQ-UHFFFAOYSA-N}}
{{#set: reconstruction category=annotation}}
+
{{#set: common name=protocatechualdehyde}}
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: molecular weight=138.123    }}
{{#set: reconstruction source=esiliculosus_genome}}
+
{{#set: common name=3,4-dihydroxybenzaldehyde|3,4-dihydroxybenzyl aldehyde|rancinamycin IV}}
 +
{{#set: produced by=RXN-8872}}

Revision as of 21:41, 17 March 2018

Metabolite CPD-7616

  • smiles:
    • C(C1(C=C(C(=CC=1)O)O))=O
  • inchi key:
    • InChIKey=IBGBGRVKPALMCQ-UHFFFAOYSA-N
  • common name:
    • protocatechualdehyde
  • molecular weight:
    • 138.123
  • Synonym(s):
    • 3,4-dihydroxybenzaldehyde
    • 3,4-dihydroxybenzyl aldehyde
    • rancinamycin IV

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links