Difference between revisions of "PWY-5966"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIAMINOPIMEPIM-RXN DIAMINOPIMEPIM-RXN] == * direction: ** REVERSIBLE * common name: ** Diaminopimel...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5966 PWY-5966] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33084 TAX-3...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Pathway]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIAMINOPIMEPIM-RXN DIAMINOPIMEPIM-RXN] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5966 PWY-5966] ==
−
* direction:
+
* taxonomic range:
−
** REVERSIBLE
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33084 TAX-33084]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-33208]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
−
** Diaminopimelate epimerase, DapF
+
** fatty acid biosynthesis initiation II
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/5.1.1.7 EC-5.1.1.7]
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reaction(s) found ==
−
* With identifiers:
+
'''2''' reactions found over '''2''' reactions in the full pathway
−
** 1 [[LL-DIAMINOPIMELATE]][c] '''<=>''' 1 [[MESO-DIAMINOPIMELATE]][c]
+
* [[3-OXOACYL-ACP-SYNTH-BASE-RXN]]
−
* With common name(s):
+
** 4 associated gene(s):
−
** 1 L,L-diaminopimelate[c] '''<=>''' 1 meso-diaminopimelate[c]
+
*** [[Ec-27_002090]]
−
 
+
*** [[Ec-12_000650]]
−
== Genes associated with this reaction  ==
+
*** [[Ec-27_003480]]
−
Genes have been associated with this reaction based on different elements listed below.
+
*** [[Ec-12_000640]]
−
* [[Ec-06_009100]]
+
** 2 reconstruction source(s) associated:
−
** ESILICULOSUS_GENOME
+
*** [[annotation-esiliculosus_genome]]
−
***EC-NUMBER
+
*** [[orthology-aragem]]
−
** [[pantograph]]-[[aragem]]
+
* [[ACP-S-ACETYLTRANSFER-RXN]]
−
== Pathways  ==
+
** 2 associated gene(s):
−
* [[PWY-5097]], L-lysine biosynthesis VI: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5097 PWY-5097]
+
*** [[Ec-12_000650]]
−
** '''7''' reactions found over '''7''' reactions in the full pathway
+
*** [[Ec-27_002090]]
−
* [[DAPLYSINESYN-PWY]], L-lysine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=DAPLYSINESYN-PWY DAPLYSINESYN-PWY]
+
** 1 reconstruction source(s) associated:
−
** '''6''' reactions found over '''9''' reactions in the full pathway
+
*** [[orthology-aragem]]
−
* [[PWY-2941]], L-lysine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2941 PWY-2941]
+
== Reaction(s) not found ==
−
** '''6''' reactions found over '''9''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[orthology]]
+
−
** Source: [[orthology-aragem]]
+
−
*** Tool: [[pantograph]]
+
−
* Category: [[annotation]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Tool: [[pathwaytools]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* ECOCYC:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15393 15393]
+
** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY-5966 PWY-5966]
−
* LIGAND-RXN:
+
{{#set: taxonomic range=TAX-33084}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R02735 R02735]
+
{{#set: taxonomic range=TAX-33208}}
−
* UNIPROT:
+
{{#set: taxonomic range=TAX-4751}}
−
** [http://www.uniprot.org/uniprot/Q9PMD8 Q9PMD8]
+
{{#set: taxonomic range=TAX-2}}
−
** [http://www.uniprot.org/uniprot/Q9JV69 Q9JV69]
+
{{#set: common name=fatty acid biosynthesis initiation II}}
−
** [http://www.uniprot.org/uniprot/P44859 P44859]
+
{{#set: reaction found=2}}
−
** [http://www.uniprot.org/uniprot/Q58519 Q58519]
+
{{#set: total reaction=2}}
−
** [http://www.uniprot.org/uniprot/P0A6K1 P0A6K1]
+
{{#set: completion rate=100.0}}
−
** [http://www.uniprot.org/uniprot/Q51564 Q51564]
+
−
** [http://www.uniprot.org/uniprot/P46814 P46814]
+
−
** [http://www.uniprot.org/uniprot/O05322 O05322]
+
−
{{#set: direction=REVERSIBLE}}
+
−
{{#set: common name=Diaminopimelate epimerase, DapF}}
+
−
{{#set: ec number=EC-5.1.1.7}}
+
−
{{#set: gene associated=Ec-06_009100}}
+
−
{{#set: in pathway=PWY-5097|DAPLYSINESYN-PWY|PWY-2941}}
+
−
{{#set: reconstruction category=orthology|annotation}}
+
−
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 19:14, 21 March 2018

Pathway PWY-5966

Reaction(s) found

2 reactions found over 2 reactions in the full pathway

Reaction(s) not found

External links





Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PWY-5966&oldid=25483"