Difference between revisions of "TYROSINE-DECARBOXYLASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-7192 RXN0-7192] == * direction: ** LEFT-TO-RIGHT * common name: ** Biotin/lipoate A/B protein...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TYROSINE-DECARBOXYLASE-RXN TYROSINE-DECARBOXYLASE-RXN] == * direction: ** LEFT-TO-RIGHT * common na...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-7192 RXN0-7192] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TYROSINE-DECARBOXYLASE-RXN TYROSINE-DECARBOXYLASE-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Biotin/lipoate A/B protein ligase
+
** Tyrosine Decarboxylase
−
** Biotin/lipoate A/B protein ligase family
+
−
** biotin-[acetyl-CoA-carboxylase] ligase
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/6.3.4.15 EC-6.3.4.15]
+
** [http://enzyme.expasy.org/EC/4.1.1.25 EC-4.1.1.25]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[BIOTIN]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[BIO-5-AMP]][c]
+
** 1 [[TYR]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[TYRAMINE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 biotin[c] '''+''' 1 H+[c] '''+''' 1 ATP[c] '''=>''' 1 diphosphate[c] '''+''' 1 biotinyl-5'-adenylate[c]
+
** 1 L-tyrosine[c] '''+''' 1 H+[c] '''=>''' 1 tyramine[c] '''+''' 1 CO2[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-01_008620]]
+
* Gene: [[Ec-14_004250]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***AUTOMATED-NAME-MATCH
+
*** Assignment: EC-NUMBER
−
* [[Ec-05_005190]]
+
−
** ESILICULOSUS_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Ec-11_004970]]
+
−
** ESILICULOSUS_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Ec-00_003530]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-3581]], (S)-reticuline biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3581 PWY-3581]
 +
** '''3''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY-6133]], (S)-reticuline biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6133 PWY-6133]
 +
** '''2''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-5254]], methanofuran biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5254 PWY-5254]
 +
** '''1''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-7297]], octopamine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7297 PWY-7297]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-5474]], hydroxycinnamic acid tyramine amides biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5474 PWY-5474]
 +
** '''1''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6802]], salidroside biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6802 PWY-6802]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
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*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14345 14345]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00736 R00736]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q06086 Q06086]
 +
** [http://www.uniprot.org/uniprot/P54768 P54768]
 +
** [http://www.uniprot.org/uniprot/P54769 P54769]
 +
** [http://www.uniprot.org/uniprot/P54770 P54770]
 +
** [http://www.uniprot.org/uniprot/O82417 O82417]
 +
** [http://www.uniprot.org/uniprot/P54771 P54771]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Biotin/lipoate A/B protein ligase}}
+
{{#set: common name=Tyrosine Decarboxylase}}
−
{{#set: common name=Biotin/lipoate A/B protein ligase family}}
+
{{#set: ec number=EC-4.1.1.25}}
−
{{#set: common name=biotin-[acetyl-CoA-carboxylase] ligase}}
+
{{#set: gene associated=Ec-14_004250}}
−
{{#set: ec number=EC-6.3.4.15}}
+
{{#set: in pathway=PWY-3581|PWY-6133|PWY-5254|PWY-7297|PWY-5474|PWY-6802}}
−
{{#set: gene associated=Ec-01_008620|Ec-05_005190|Ec-11_004970|Ec-00_003530}}
+
−
{{#set: in pathway=}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:15, 21 March 2018

Reaction TYROSINE-DECARBOXYLASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Tyrosine Decarboxylase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 L-tyrosine[c] + 1 H+[c] => 1 tyramine[c] + 1 CO2[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-3581, (S)-reticuline biosynthesis I: PWY-3581
    • 3 reactions found over 11 reactions in the full pathway
  • PWY-6133, (S)-reticuline biosynthesis II: PWY-6133
    • 2 reactions found over 7 reactions in the full pathway
  • PWY-5254, methanofuran biosynthesis: PWY-5254
    • 1 reactions found over 8 reactions in the full pathway
  • PWY-7297, octopamine biosynthesis: PWY-7297
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-5474, hydroxycinnamic acid tyramine amides biosynthesis: PWY-5474
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-6802, salidroside biosynthesis: PWY-6802
    • 2 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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