Difference between revisions of "Ec-00 007350"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1882 RXN-1882] == * direction: ** REVERSIBLE * common name: ** GDP-mannose 3,5-epimerase * ec n...")
(Created page with "Category:Gene == Gene Ec-00_007350 == * left end position: ** 11795180 * transcription direction: ** POSITIVE * right end position: ** 11796987 * centisome position: ** 62...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1882 RXN-1882] ==
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== Gene Ec-00_007350 ==
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* direction:
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* left end position:
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** REVERSIBLE
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** 11795180
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* common name:
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* transcription direction:
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** GDP-mannose 3,5-epimerase
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/5.1.3.18 EC-5.1.3.18]
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** 11796987
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* centisome position:
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** 62.255417   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0552_0015
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** Esi0552_0015
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[4OHBENZOATE-OCTAPRENYLTRANSFER-RXN]]
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** 1 [[GDP-MANNOSE]][c] '''<=>''' 1 [[GDP-L-GALACTOSE]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 GDP-&alpha;-D-mannose[c] '''<=>''' 1 GDP-&beta;-L-galactose[c]
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* Reaction: [[GPPSYN-RXN]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-06_004510]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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** [[pantograph]]-[[aragem]]
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== Pathways  ==
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* [[PWY4FS-12]], VTC2 cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY4FS-12 PWY4FS-12]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[PWY4FS-13]], extended VTC2 cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY4FS-13 PWY4FS-13]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-5115]], GDP-L-galactose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5115 PWY-5115]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-882]], L-ascorbate biosynthesis I (L-galactose pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-882 PWY-882]
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** '''7''' reactions found over '''8''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: go-term
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== Pathways associated ==
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* [[PWY-7736]]
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* [[PWY-7410]]
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* [[PWY-6859]]
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* [[PWY-7709]]
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* [[PWY-6383]]
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* [[PWY-7182]]
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* [[PWY-6708]]
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* [[PWY-7141]]
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* [[PWY-5123]]
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* [[PWY-5122]]
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* [[PWY-7102]]
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* [[PWY-7659]]
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* [[PWY-5870]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=11795180}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11144 11144]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=11796987}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00889 R00889]
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{{#set: centisome position=62.255417    }}
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=Esi_0552_0015|Esi0552_0015}}
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{{#set: common name=GDP-mannose 3,5-epimerase}}
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{{#set: reaction associated=4OHBENZOATE-OCTAPRENYLTRANSFER-RXN|GPPSYN-RXN}}
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{{#set: ec number=EC-5.1.3.18}}
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{{#set: pathway associated=PWY-7736|PWY-7410|PWY-6859|PWY-7709|PWY-6383|PWY-7182|PWY-6708|PWY-7141|PWY-5123|PWY-5122|PWY-7102|PWY-7659|PWY-5870}}
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{{#set: gene associated=Ec-06_004510}}
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{{#set: in pathway=PWY4FS-12|PWY4FS-13|PWY-5115|PWY-882}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 19:15, 21 March 2018

Gene Ec-00_007350

  • left end position:
    • 11795180
  • transcription direction:
    • POSITIVE
  • right end position:
    • 11796987
  • centisome position:
    • 62.255417
  • Synonym(s):
    • Esi_0552_0015
    • Esi0552_0015

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-00_007350&oldid=25604"