Difference between revisions of "TRP"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13162 RXN-13162] == * direction: ** LEFT-TO-RIGHT * common name: ** Isopentenyl-diphosphate del...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=TRP TRP] == * smiles: ** C2(NC1(C=CC=CC=1C(CC([N+])C(=O)[O-])=2)) * inchi key: ** InChIKey=QIVB...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13162 RXN-13162] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=TRP TRP] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** C2(NC1(C=CC=CC=1C(CC([N+])C(=O)[O-])=2))
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* inchi key:
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** InChIKey=QIVBCDIJIAJPQS-VIFPVBQESA-N
 
* common name:
 
* common name:
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** Isopentenyl-diphosphate delta-isomerase type 1 fused to squalene synthase; probably two separate ORFs
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** L-tryptophan
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* ec number:
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* molecular weight:
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** [http://enzyme.expasy.org/EC/2.5.1.21 EC-2.5.1.21]
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** 204.228   
 
* Synonym(s):
 
* Synonym(s):
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** trp
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** W
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** tryptacin
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** trofan
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** tryptophan
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** 2-amino-3-indolylpropanic acid
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** L-trp
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[TRYPTOPHAN--TRNA-LIGASE-RXN]]
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** 2 [[FARNESYL-PP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''=>''' 1 [[NAD-P-OR-NOP]][c] '''+''' 2 [[PPI]][c] '''+''' 1 [[SQUALENE]][c]
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* [[biomass_rxn]]
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* With common name(s):
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* [[RXN-8665]]
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** 2 (2E,6E)-farnesyl diphosphate[c] '''+''' 1 H+[c] '''+''' 1 NAD(P)H[c] '''=>''' 1 NAD(P)+[c] '''+''' 2 diphosphate[c] '''+''' 1 squalene[c]
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== Reaction(s) known to produce the compound ==
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* [[TRYPSYN-RXN]]
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== Genes associated with this reaction  ==
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* [[RXN0-2382]]
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Genes have been associated with this reaction based on different elements listed below.
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== Reaction(s) of unknown directionality ==
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* [[Ec-11_001030]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-5670]], epoxysqualene biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5670 PWY-5670]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* CAS : 73-22-3
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=32302 32302]
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* BIGG : 33772
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=32296 32296]
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* PUBCHEM:
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* LIGAND-RXN:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=6923516 6923516]
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** [http://www.genome.jp/dbget-bin/www_bget?R06223 R06223]
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* HMDB : HMDB00929
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{{#set: direction=LEFT-TO-RIGHT}}
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* LIGAND-CPD:
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{{#set: common name=Isopentenyl-diphosphate delta-isomerase type 1 fused to squalene synthase; probably two separate ORFs}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00078 C00078]
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{{#set: ec number=EC-2.5.1.21}}
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* CHEBI:
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{{#set: gene associated=Ec-11_001030}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57912 57912]
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{{#set: in pathway=PWY-5670}}
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* METABOLIGHTS : MTBLC57912
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{{#set: reconstruction category=annotation}}
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{{#set: smiles=C2(NC1(C=CC=CC=1C(CC([N+])C(=O)[O-])=2))}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: inchi key=InChIKey=QIVBCDIJIAJPQS-VIFPVBQESA-N}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: common name=L-tryptophan}}
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{{#set: molecular weight=204.228    }}
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{{#set: common name=trp|W|tryptacin|trofan|tryptophan|2-amino-3-indolylpropanic acid|L-trp}}
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{{#set: consumed by=TRYPTOPHAN--TRNA-LIGASE-RXN|biomass_rxn|RXN-8665}}
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{{#set: produced by=TRYPSYN-RXN|RXN0-2382}}

Latest revision as of 19:15, 21 March 2018

Metabolite TRP

  • smiles:
    • C2(NC1(C=CC=CC=1C(CC([N+])C(=O)[O-])=2))
  • inchi key:
    • InChIKey=QIVBCDIJIAJPQS-VIFPVBQESA-N
  • common name:
    • L-tryptophan
  • molecular weight:
    • 204.228
  • Synonym(s):
    • trp
    • W
    • tryptacin
    • trofan
    • tryptophan
    • 2-amino-3-indolylpropanic acid
    • L-trp

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • CAS : 73-22-3
  • BIGG : 33772
  • PUBCHEM:
  • HMDB : HMDB00929
  • LIGAND-CPD:
  • CHEBI:
  • METABOLIGHTS : MTBLC57912
"C2(NC1(C=CC=CC=1C(CC([N+])C(=O)[O-])=2))" cannot be used as a page name in this wiki.




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