Difference between revisions of "CHD-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CDP-CHOLINE CDP-CHOLINE] == * smiles: ** C[N+](C)(C)CCOP([O-])(=O)OP([O-])(=O)OCC1(OC(C(O)C(O)1...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CHD-RXN CHD-RXN] == * direction: ** REVERSIBLE * common name: ** choline dehydrogenase * ec number:...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CDP-CHOLINE CDP-CHOLINE] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CHD-RXN CHD-RXN] ==
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* smiles:
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* direction:
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** C[N+](C)(C)CCOP([O-])(=O)OP([O-])(=O)OCC1(OC(C(O)C(O)1)N2(C=CC(=NC2=O)N))
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** REVERSIBLE
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* inchi key:
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** InChIKey=RZZPDXZPRHQOCG-OJAKKHQRSA-M
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* common name:
 
* common name:
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** CDP-choline
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** choline dehydrogenase
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* molecular weight:
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* ec number:
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** 487.319   
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** [http://enzyme.expasy.org/EC/1.1.99.1 EC-1.1.99.1]
 
* Synonym(s):
 
* Synonym(s):
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** citicoline
 
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** citicholine
 
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** cidifos
 
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** cyticholine
 
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** cytidine 5'-diphosphocholine
 
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** cytidine diphosphate choline
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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* [[2.7.7.15-RXN]]
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** 1 [[Acceptor]][c] '''+''' 1 [[CHOLINE]][c] '''<=>''' 1 [[Donor-H2]][c] '''+''' 1 [[BETAINE_ALDEHYDE]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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* [[RXN-5781]]
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** 1 an oxidized unknown electron acceptor[c] '''+''' 1 choline[c] '''<=>''' 1 an reduced unknown electron acceptor[c] '''+''' 1 betaine aldehyde[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-00_005920]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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== Pathways  ==
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* [[CHOLINE-BETAINE-ANA-PWY]], choline degradation I: [http://metacyc.org/META/NEW-IMAGE?object=CHOLINE-BETAINE-ANA-PWY CHOLINE-BETAINE-ANA-PWY]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[BETSYN-PWY]], glycine betaine biosynthesis I (Gram-negative bacteria): [http://metacyc.org/META/NEW-IMAGE?object=BETSYN-PWY BETSYN-PWY]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* CAS : 987-78-0
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* RHEA:
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* PUBCHEM:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17433 17433]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=25202509 25202509]
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* LIGAND-RXN:
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* CHEBI:
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** [http://www.genome.jp/dbget-bin/www_bget?R01025 R01025]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=58779 58779]
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* UNIPROT:
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/P17444 P17444]
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** [http://www.genome.jp/dbget-bin/www_bget?C00307 C00307]
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{{#set: direction=REVERSIBLE}}
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* HMDB : HMDB01413
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{{#set: common name=choline dehydrogenase}}
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{{#set: smiles=C[N+](C)(C)CCOP([O-])(=O)OP([O-])(=O)OCC1(OC(C(O)C(O)1)N2(C=CC(=NC2=O)N))}}
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{{#set: ec number=EC-1.1.99.1}}
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{{#set: inchi key=InChIKey=RZZPDXZPRHQOCG-OJAKKHQRSA-M}}
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{{#set: gene associated=Ec-00_005920}}
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{{#set: common name=CDP-choline}}
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{{#set: in pathway=CHOLINE-BETAINE-ANA-PWY|BETSYN-PWY}}
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{{#set: molecular weight=487.319    }}
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{{#set: reconstruction category=annotation}}
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{{#set: common name=citicoline|citicholine|cidifos|cyticholine|cytidine 5'-diphosphocholine|cytidine diphosphate choline}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: produced by=2.7.7.15-RXN}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reversible reaction associated=RXN-5781}}
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Latest revision as of 20:16, 21 March 2018

Reaction CHD-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • choline dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 an oxidized unknown electron acceptor[c] + 1 choline[c] <=> 1 an reduced unknown electron acceptor[c] + 1 betaine aldehyde[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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