Difference between revisions of "PWY-7036"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9535 RXN-9535] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxoacyl-[acyl-carrier-prote...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7036 PWY-7036] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-27...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9535 RXN-9535] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7036 PWY-7036] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
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** 3-oxoacyl-[acyl-carrier-protein] synthase
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** very long chain fatty acid biosynthesis II
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** Beta-ketoacyl synthase, N-terminal
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** Thiolase-like, subgroup
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** beta-ketoacyl synthase, partial
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* ec number:
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** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
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** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
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** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
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* Synonym(s):
 
* Synonym(s):
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** β-ketoacyl-ACP synthase I
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** cerotate biosynthesis
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** β-ketoacyl-acyl carrier protein synthetase
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** hexacosanoate biosynthesis
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** β-ketoacyl-[acyl carrier protein] synthase
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−
** condensing enzyme
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** β-ketoacyl acyl carrier protein synthase
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−
** 3-oxoacyl-[acyl-carrier-protein] synthase
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** acyl-[acyl-carrier-protein]:malonyl-[acyl-carrier-protein] C-acyltransferase (decarboxylating)
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''4''' reactions found over '''16''' reactions in the full pathway
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** 1 [[MALONYL-ACP]][c] '''+''' 1 [[Dodecanoyl-ACPs]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[3-oxo-myristoyl-ACPs]][c] '''+''' 1 [[ACP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
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* [[RXN-13295]]
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* With common name(s):
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** 0 associated gene:
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** 1 a malonyl-[acp][c] '''+''' 1 a dodecanoyl-[acp][c] '''+''' 1 H+[c] '''=>''' 1 a 3-oxo-myristoyl-[acp][c] '''+''' 1 a holo-[acyl-carrier protein][c] '''+''' 1 CO2[c]
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** 1 reconstruction source(s) associated:
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*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
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== Genes associated with this reaction  ==
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* [[RXN-13299]]
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Genes have been associated with this reaction based on different elements listed below.
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** 0 associated gene:
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* [[Ec-27_002090]]
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** 1 reconstruction source(s) associated:
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** ESILICULOSUS_GENOME
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*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
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***EC-NUMBER
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* [[RXN-13303]]
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** [[pantograph]]-[[aragem]]
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** 0 associated gene:
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** [[pantograph]]-[[aragem]]
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** 1 reconstruction source(s) associated:
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* [[Ec-12_000650]]
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*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
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** ESILICULOSUS_GENOME
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* [[RXN-13307]]
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***GO-TERM
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** 0 associated gene:
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** [[pantograph]]-[[aragem]]
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** 1 reconstruction source(s) associated:
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** [[pantograph]]-[[aragem]]
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*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
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* [[Ec-27_003480]]
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== Reaction(s) not found ==
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** ESILICULOSUS_GENOME
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13294 RXN-13294]
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***EC-NUMBER
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13296 RXN-13296]
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* [[Ec-12_000640]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13297 RXN-13297]
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** ESILICULOSUS_GENOME
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13298 RXN-13298]
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***EC-NUMBER
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13300 RXN-13300]
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== Pathways  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13301 RXN-13301]
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* [[PWY-5971]], palmitate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5971 PWY-5971]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13302 RXN-13302]
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** '''28''' reactions found over '''31''' reactions in the full pathway
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13304 RXN-13304]
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== Reconstruction information  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13305 RXN-13305]
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* Category: [[orthology]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13306 RXN-13306]
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** Source: [[orthology-aragem]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13308 RXN-13308]
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*** Tool: [[pantograph]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13309 RXN-13309]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-2759}}
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{{#set: common name=3-oxoacyl-[acyl-carrier-protein] synthase}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: common name=Beta-ketoacyl synthase, N-terminal}}
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{{#set: common name=very long chain fatty acid biosynthesis II}}
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{{#set: common name=Thiolase-like, subgroup}}
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{{#set: common name=cerotate biosynthesis|hexacosanoate biosynthesis}}
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{{#set: common name=beta-ketoacyl synthase, partial}}
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{{#set: reaction found=4}}
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{{#set: ec number=EC-2.3.1.86}}
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{{#set: total reaction=16}}
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{{#set: ec number=EC-2.3.1.85}}
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{{#set: completion rate=25.0}}
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{{#set: ec number=EC-2.3.1.41}}
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−
{{#set: common name=β-ketoacyl-ACP synthase I|β-ketoacyl-acyl carrier protein synthetase|β-ketoacyl-[acyl carrier protein] synthase|condensing enzyme|β-ketoacyl acyl carrier protein synthase|3-oxoacyl-[acyl-carrier-protein] synthase|acyl-[acyl-carrier-protein]:malonyl-[acyl-carrier-protein] C-acyltransferase (decarboxylating)}}
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{{#set: gene associated=Ec-27_002090|Ec-12_000650|Ec-27_003480|Ec-12_000640}}
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{{#set: in pathway=PWY-5971}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 19:17, 21 March 2018

Pathway PWY-7036

  • taxonomic range:
  • common name:
    • very long chain fatty acid biosynthesis II
  • Synonym(s):
    • cerotate biosynthesis
    • hexacosanoate biosynthesis

Reaction(s) found

4 reactions found over 16 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PWY-7036&oldid=25842"