Difference between revisions of "Ec-03 003610"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-DEHYDROQUINATE-SYNTHASE-RXN 3-DEHYDROQUINATE-SYNTHASE-RXN] == * direction: ** LEFT-TO-RIGHT * com...")
(Created page with "Category:Gene == Gene Ec-03_003610 == * left end position: ** 4074466 * transcription direction: ** POSITIVE * right end position: ** 4083472 * centisome position: ** 62.4...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-DEHYDROQUINATE-SYNTHASE-RXN 3-DEHYDROQUINATE-SYNTHASE-RXN] ==
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== Gene Ec-03_003610 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 4074466
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* common name:
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* transcription direction:
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** 3-dehydroquinate synthase
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** POSITIVE
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** 3-dehydroquinate synthase AroB
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* right end position:
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* ec number:
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** 4083472
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** [http://enzyme.expasy.org/EC/4.2.3.4 EC-4.2.3.4]
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* centisome position:
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** 62.408905   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0223_0034
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** Esi0223_0034
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** HDS
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[RXN0-882]]
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** 1 [[3-DEOXY-D-ARABINO-HEPTULOSONATE-7-P]][c] '''=>''' 1 [[DEHYDROQUINATE]][c] '''+''' 1 [[Pi]][c]
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* With common name(s):
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** 1 3-deoxy-D-arabino-heptulosonate 7-phosphate[c] '''=>''' 1 3-dehydroquinate[c] '''+''' 1 phosphate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-06_009700]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-00_002010]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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** [[pantograph]]-[[aragem]]
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* [[Ec-24_000340]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-6164]], 3-dehydroquinate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6164 PWY-6164]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PWY-7560]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=4074466}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21968 21968]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=4083472}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03083 R03083]
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{{#set: centisome position=62.408905    }}
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* UNIPROT:
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{{#set: common name=Esi_0223_0034|Esi0223_0034|HDS}}
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** [http://www.uniprot.org/uniprot/P07547 P07547]
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{{#set: reaction associated=RXN0-882}}
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** [http://www.uniprot.org/uniprot/P08566 P08566]
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{{#set: pathway associated=PWY-7560}}
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** [http://www.uniprot.org/uniprot/Q9CES8 Q9CES8]
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** [http://www.uniprot.org/uniprot/Q9PNT2 Q9PNT2]
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** [http://www.uniprot.org/uniprot/P43879 P43879]
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** [http://www.uniprot.org/uniprot/Q9JVW5 Q9JVW5]
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** [http://www.uniprot.org/uniprot/P0A4Z4 P0A4Z4]
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** [http://www.uniprot.org/uniprot/P07639 P07639]
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** [http://www.uniprot.org/uniprot/Q9P7R0 Q9P7R0]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=3-dehydroquinate synthase}}
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{{#set: common name=3-dehydroquinate synthase AroB}}
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{{#set: ec number=EC-4.2.3.4}}
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{{#set: gene associated=Ec-06_009700|Ec-00_002010|Ec-24_000340}}
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{{#set: in pathway=PWY-6164}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 19:17, 21 March 2018

Gene Ec-03_003610

  • left end position:
    • 4074466
  • transcription direction:
    • POSITIVE
  • right end position:
    • 4083472
  • centisome position:
    • 62.408905
  • Synonym(s):
    • Esi_0223_0034
    • Esi0223_0034
    • HDS

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-03_003610&oldid=25910"