Difference between revisions of "1.8.4.12-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-2043 RXN-2043] == * direction: ** LEFT-TO-RIGHT * common name: ** Glycoside hydrolase, catalyti...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.8.4.12-RXN 1.8.4.12-RXN] == * direction: ** REVERSIBLE * common name: ** peptide-methionine (R)-S...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-2043 RXN-2043] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.8.4.12-RXN 1.8.4.12-RXN] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** Glycoside hydrolase, catalytic domain
+
** peptide-methionine (R)-S-oxide reductase
−
** Glycoside hydrolase/deacetylase, beta/alpha-barrel
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.2.1.4 EC-3.2.1.4]
+
** [http://enzyme.expasy.org/EC/1.8.4.12 EC-1.8.4.12]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** n [[WATER]][c] '''+''' 1 [[CELLULOSE]][c] '''=>''' n [[Cellodextrins]][c]
+
** 1 [[Ox-Thioredoxin]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[Protein-L-methionine]][c] '''<=>''' 1 [[Protein-L-methionine-R-S-oxides]][c] '''+''' 1 [[Red-Thioredoxin]][c]
 
* With common name(s):
 
* With common name(s):
−
** n H2O[c] '''+''' 1 cellulose[c] '''=>''' n a cellodextrin[c]
+
** 1 an oxidized thioredoxin[c] '''+''' 1 H2O[c] '''+''' 1 a [protein]-L-methionine[c] '''<=>''' 1 a protein-L-methionine-(R)-S-oxide[c] '''+''' 1 a reduced thioredoxin[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-08_004650]]
+
* Gene: [[Ec-05_006220]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***AUTOMATED-NAME-MATCH
+
*** Assignment: GO-TERM
−
* [[Ec-23_003530]]
+
* Gene: [[Ec-12_004320]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***AUTOMATED-NAME-MATCH
+
*** Assignment: GO-TERM
−
* [[Ec-19_000430]]
+
* Gene: [[Ec-00_006660]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***AUTOMATED-NAME-MATCH
+
*** Assignment: GO-TERM
 +
* Gene: [[Ec-28_000030]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-27_006120]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6788]], cellulose degradation II (fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6788 PWY-6788]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[annotation]]
−
** [[pathwaytools]]:
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[esiliculosus_genome]]
+
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* UNIPROT:
+
* RHEA:
−
** [http://www.uniprot.org/uniprot/O64949 O64949]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24164 24164]
−
** [http://www.uniprot.org/uniprot/O64402 O64402]
+
* LIGAND-RXN:
−
** [http://www.uniprot.org/uniprot/O59943 O59943]
+
** [http://www.genome.jp/dbget-bin/www_bget?R07607 R07607]
−
** [http://www.uniprot.org/uniprot/P22503 P22503]
+
{{#set: direction=REVERSIBLE}}
−
** [http://www.uniprot.org/uniprot/O50014 O50014]
+
{{#set: common name=peptide-methionine (R)-S-oxide reductase}}
−
** [http://www.uniprot.org/uniprot/O50013 O50013]
+
{{#set: ec number=EC-1.8.4.12}}
−
** [http://www.uniprot.org/uniprot/O50012 O50012]
+
{{#set: gene associated=Ec-05_006220|Ec-12_004320|Ec-00_006660|Ec-28_000030|Ec-27_006120}}
−
** [http://www.uniprot.org/uniprot/O50011 O50011]
+
{{#set: in pathway=}}
−
** [http://www.uniprot.org/uniprot/O64401 O64401]
+
−
** [http://www.uniprot.org/uniprot/O23954 O23954]
+
−
** [http://www.uniprot.org/uniprot/O22298 O22298]
+
−
** [http://www.uniprot.org/uniprot/O22297 O22297]
+
−
** [http://www.uniprot.org/uniprot/O04890 O04890]
+
−
** [http://www.uniprot.org/uniprot/Q39848 Q39848]
+
−
** [http://www.uniprot.org/uniprot/Q39847 Q39847]
+
−
** [http://www.uniprot.org/uniprot/O04972 O04972]
+
−
** [http://www.uniprot.org/uniprot/Q41012 Q41012]
+
−
** [http://www.uniprot.org/uniprot/Q39826 Q39826]
+
−
** [http://www.uniprot.org/uniprot/Q42872 Q42872]
+
−
** [http://www.uniprot.org/uniprot/Q42871 Q42871]
+
−
** [http://www.uniprot.org/uniprot/Q9SVJ2 Q9SVJ2]
+
−
** [http://www.uniprot.org/uniprot/Q9SVJ3 Q9SVJ3]
+
−
** [http://www.uniprot.org/uniprot/Q9SVJ4 Q9SVJ4]
+
−
** [http://www.uniprot.org/uniprot/Q9SUS0 Q9SUS0]
+
−
** [http://www.uniprot.org/uniprot/Q9SZ90 Q9SZ90]
+
−
** [http://www.uniprot.org/uniprot/O64890 O64890]
+
−
** [http://www.uniprot.org/uniprot/O64889 O64889]
+
−
** [http://www.uniprot.org/uniprot/O82513 O82513]
+
−
** [http://www.uniprot.org/uniprot/O80497 O80497]
+
−
** [http://www.uniprot.org/uniprot/O64891 O64891]
+
−
** [http://www.uniprot.org/uniprot/O81416 O81416]
+
−
** [http://www.uniprot.org/uniprot/O48766 O48766]
+
−
** [http://www.uniprot.org/uniprot/Q55365 Q55365]
+
−
** [http://www.uniprot.org/uniprot/Q38890 Q38890]
+
−
** [http://www.uniprot.org/uniprot/Q12665 Q12665]
+
−
** [http://www.uniprot.org/uniprot/Q43751 Q43751]
+
−
** [http://www.uniprot.org/uniprot/Q9SML6 Q9SML6]
+
−
** [http://www.uniprot.org/uniprot/Q43750 Q43750]
+
−
** [http://www.uniprot.org/uniprot/Q38817 Q38817]
+
−
** [http://www.uniprot.org/uniprot/P43317 P43317]
+
−
** [http://www.uniprot.org/uniprot/Q42875 Q42875]
+
−
** [http://www.uniprot.org/uniprot/Q42660 Q42660]
+
−
** [http://www.uniprot.org/uniprot/Q59665 Q59665]
+
−
** [http://www.uniprot.org/uniprot/Q59395 Q59395]
+
−
** [http://www.uniprot.org/uniprot/Q43149 Q43149]
+
−
** [http://www.uniprot.org/uniprot/Q12624 Q12624]
+
−
** [http://www.uniprot.org/uniprot/P38534 P38534]
+
−
** [http://www.uniprot.org/uniprot/P23666 P23666]
+
−
** [http://www.uniprot.org/uniprot/P19424 P19424]
+
−
** [http://www.uniprot.org/uniprot/P07982 P07982]
+
−
** [http://www.uniprot.org/uniprot/Q05156 Q05156]
+
−
** [http://www.uniprot.org/uniprot/Q7M0M9 Q7M0M9]
+
−
** [http://www.uniprot.org/uniprot/Q9R5L7 Q9R5L7]
+
−
** [http://www.uniprot.org/uniprot/Q53302 Q53302]
+
−
** [http://www.uniprot.org/uniprot/P26224 P26224]
+
−
** [http://www.uniprot.org/uniprot/P21834 P21834]
+
−
** [http://www.uniprot.org/uniprot/P21833 P21833]
+
−
** [http://www.uniprot.org/uniprot/P22669 P22669]
+
−
** [http://www.uniprot.org/uniprot/P05522 P05522]
+
−
** [http://www.uniprot.org/uniprot/P07103 P07103]
+
−
** [http://www.uniprot.org/uniprot/P10474 P10474]
+
−
** [http://www.uniprot.org/uniprot/Q46002 Q46002]
+
−
** [http://www.uniprot.org/uniprot/P16630 P16630]
+
−
** [http://www.uniprot.org/uniprot/Q59241 Q59241]
+
−
** [http://www.uniprot.org/uniprot/P13933 P13933]
+
−
** [http://www.uniprot.org/uniprot/P07985 P07985]
+
−
** [http://www.uniprot.org/uniprot/P19570 P19570]
+
−
** [http://www.uniprot.org/uniprot/P20847 P20847]
+
−
** [http://www.uniprot.org/uniprot/P23549 P23549]
+
−
** [http://www.uniprot.org/uniprot/P23550 P23550]
+
−
** [http://www.uniprot.org/uniprot/P19487 P19487]
+
−
** [http://www.uniprot.org/uniprot/P16218 P16218]
+
−
** [http://www.uniprot.org/uniprot/P23340 P23340]
+
−
** [http://www.uniprot.org/uniprot/Q01409 Q01409]
+
−
** [http://www.uniprot.org/uniprot/O67401 O67401]
+
−
** [http://www.uniprot.org/uniprot/Q7M4T4 Q7M4T4]
+
−
** [http://www.uniprot.org/uniprot/P28622 P28622]
+
−
** [http://www.uniprot.org/uniprot/P94622 P94622]
+
−
** [http://www.uniprot.org/uniprot/Q45554 Q45554]
+
−
** [http://www.uniprot.org/uniprot/Q59963 Q59963]
+
−
** [http://www.uniprot.org/uniprot/P54937 P54937]
+
−
** [http://www.uniprot.org/uniprot/Q03882 Q03882]
+
−
** [http://www.uniprot.org/uniprot/P10475 P10475]
+
−
** [http://www.uniprot.org/uniprot/P10477 P10477]
+
−
** [http://www.uniprot.org/uniprot/P04954 P04954]
+
−
** [http://www.uniprot.org/uniprot/P04956 P04956]
+
−
** [http://www.uniprot.org/uniprot/P04955 P04955]
+
−
** [http://www.uniprot.org/uniprot/Q01786 Q01786]
+
−
** [http://www.uniprot.org/uniprot/P26221 P26221]
+
−
** [http://www.uniprot.org/uniprot/P29719 P29719]
+
−
** [http://www.uniprot.org/uniprot/P06565 P06565]
+
−
** [http://www.uniprot.org/uniprot/Q59290 Q59290]
+
−
** [http://www.uniprot.org/uniprot/Q12714 Q12714]
+
−
** [http://www.uniprot.org/uniprot/P17877 P17877]
+
−
** [http://www.uniprot.org/uniprot/P29019 P29019]
+
−
** [http://www.uniprot.org/uniprot/P16216 P16216]
+
−
** [http://www.uniprot.org/uniprot/P17974 P17974]
+
−
** [http://www.uniprot.org/uniprot/P26222 P26222]
+
−
** [http://www.uniprot.org/uniprot/Q53324 Q53324]
+
−
** [http://www.uniprot.org/uniprot/Q05332 Q05332]
+
−
** [http://www.uniprot.org/uniprot/P23548 P23548]
+
−
** [http://www.uniprot.org/uniprot/P06564 P06564]
+
−
** [http://www.uniprot.org/uniprot/Q45532 Q45532]
+
−
** [http://www.uniprot.org/uniprot/P07983 P07983]
+
−
** [http://www.uniprot.org/uniprot/P07981 P07981]
+
−
** [http://www.uniprot.org/uniprot/P06566 P06566]
+
−
** [http://www.uniprot.org/uniprot/P07984 P07984]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=Glycoside hydrolase, catalytic domain}}
+
−
{{#set: common name=Glycoside hydrolase/deacetylase, beta/alpha-barrel}}
+
−
{{#set: ec number=EC-3.2.1.4}}
+
−
{{#set: gene associated=Ec-08_004650|Ec-23_003530|Ec-19_000430}}
+
−
{{#set: in pathway=PWY-6788}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=esiliculosus_genome}}
 

Latest revision as of 19:07, 21 March 2018

Reaction 1.8.4.12-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • peptide-methionine (R)-S-oxide reductase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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