Difference between revisions of "PWY-6344"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN3O-1803 RXN3O-1803] == * direction: ** LEFT-TO-RIGHT * common name: ** Thiolase-like, subgroup *...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6344 PWY-6344] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-200918 TAX-...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN3O-1803 RXN3O-1803] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6344 PWY-6344] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-200918 TAX-200918]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-201174 TAX-201174]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1239 TAX-1239]
 
* common name:
 
* common name:
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** Thiolase-like, subgroup
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** L-ornithine degradation II (Stickland reaction)
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** Beta-ketoacyl synthase, N-terminal
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** beta-ketoacyl synthase, partial
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** 3-oxoacyl-[acyl-carrier-protein] synthase
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* ec number:
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** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
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** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''3''' reactions found over '''9''' reactions in the full pathway
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** 1 [[MALONYL-ACP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Palmitoyl-ACPs]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[3-oxo-stearoyl-ACPs]][c] '''+''' 1 [[ACP]][c]
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* [[ORNITHINE-GLU-AMINOTRANSFERASE-RXN]]
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* With common name(s):
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** 1 associated gene(s):
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** 1 a malonyl-[acp][c] '''+''' 1 H+[c] '''+''' 1 a palmitoyl-[acp][c] '''=>''' 1 CO2[c] '''+''' 1 a 3-oxo-stearoyl-[acp][c] '''+''' 1 a holo-[acyl-carrier protein][c]
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*** [[Ec-21_003730]]
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** 1 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[annotation-esiliculosus_genome]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[PYRROLINECARBREDUCT-RXN]]
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* [[Ec-12_000640]]
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** 5 associated gene(s):
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** ESILICULOSUS_GENOME
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*** [[Ec-07_007350]]
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***EC-NUMBER
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*** [[Ec-07_007360]]
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** [[pantograph]]-[[aragem]]
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*** [[Ec-07_007340]]
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* [[Ec-27_002090]]
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*** [[Ec-05_006410]]
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** ESILICULOSUS_GENOME
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*** [[Ec-03_004680]]
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***EC-NUMBER
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** 1 reconstruction source(s) associated:
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** [[pantograph]]-[[aragem]]
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*** [[annotation-esiliculosus_genome]]
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* [[Ec-12_000650]]
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* [[SPONTPRO-RXN]]
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** ESILICULOSUS_GENOME
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** 0 associated gene:
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***GO-TERM
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** 1 reconstruction source(s) associated:
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* [[Ec-27_003480]]
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*** [[annotation-esiliculosus_genome]]
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** ESILICULOSUS_GENOME
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== Reaction(s) not found ==
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***EC-NUMBER
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* [http://metacyc.org/META/NEW-IMAGE?object=24-DIAMINOPENTANOATE-DEHYDROGENASE-RXN 24-DIAMINOPENTANOATE-DEHYDROGENASE-RXN]
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** [[pantograph]]-[[aragem]]
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* [http://metacyc.org/META/NEW-IMAGE?object=AKPTHIOL-RXN AKPTHIOL-RXN]
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== Pathways  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=ORNITHINE-RACEMASE-RXN ORNITHINE-RACEMASE-RXN]
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* [[PWY3O-355]], stearate biosynthesis III (fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY3O-355 PWY3O-355]
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* [http://metacyc.org/META/NEW-IMAGE?object=ORNMUTST-RXN ORNMUTST-RXN]
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** '''3''' reactions found over '''6''' reactions in the full pathway
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* [http://metacyc.org/META/NEW-IMAGE?object=PRDABST-RXN PRDABST-RXN]
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== Reconstruction information  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=PROLINE-RACEMASE-RXN PROLINE-RACEMASE-RXN]
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-200918}}
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{{#set: common name=Thiolase-like, subgroup}}
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{{#set: taxonomic range=TAX-201174}}
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{{#set: common name=Beta-ketoacyl synthase, N-terminal}}
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{{#set: taxonomic range=TAX-1239}}
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{{#set: common name=beta-ketoacyl synthase, partial}}
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{{#set: common name=L-ornithine degradation II (Stickland reaction)}}
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{{#set: common name=3-oxoacyl-[acyl-carrier-protein] synthase}}
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{{#set: reaction found=3}}
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{{#set: ec number=EC-2.3.1.86}}
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{{#set: total reaction=9}}
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{{#set: ec number=EC-2.3.1.41}}
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{{#set: completion rate=33.0}}
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{{#set: gene associated=Ec-12_000640|Ec-27_002090|Ec-12_000650|Ec-27_003480}}
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{{#set: in pathway=PWY3O-355}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 19:20, 21 March 2018

Pathway PWY-6344

Reaction(s) found

3 reactions found over 9 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PWY-6344&oldid=26251"