Difference between revisions of "Ec-17 000870"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=LCYSDESULF-RXN LCYSDESULF-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Pyridoxal phospha...")
(Created page with "Category:Gene == Gene Ec-17_000870 == * left end position: ** 780761 * transcription direction: ** POSITIVE * right end position: ** 794547 * centisome position: ** 16.272...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=LCYSDESULF-RXN LCYSDESULF-RXN] ==
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== Gene Ec-17_000870 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 780761
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* common name:
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* transcription direction:
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** Pyridoxal phosphate-dependent transferase, major region, subdomain 1
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/4.4.1.1 EC-4.4.1.1]
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** 794547
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** [http://enzyme.expasy.org/EC/4.4.1.28 EC-4.4.1.28]
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* centisome position:
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** 16.272814   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0016_0105
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** Esi0016_0105
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** PEX6, PEROXIN 6
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ATPASE-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[CYS]][c] '''=>''' 1 [[HS]][c] '''+''' 1 [[AMMONIUM]][c] '''+''' 1 [[PYRUVATE]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: go-term
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** 1 H2O[c] '''+''' 1 L-cysteine[c] '''=>''' 1 hydrogen sulfide[c] '''+''' 1 ammonium[c] '''+''' 1 pyruvate[c]
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* Reaction: [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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** Source: [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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*** Assignment: go-term
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-12195]]
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* [[Ec-12_003100]]
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** Source: [[annotation-esiliculosus_genome]]
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** ESILICULOSUS_GENOME
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*** Assignment: go-term
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***EC-NUMBER
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* Reaction: [[RXN-12196]]
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== Pathways  ==
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** Source: [[annotation-esiliculosus_genome]]
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== Reconstruction information  ==
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*** Assignment: go-term
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* Category: [[annotation]]
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* Reaction: [[RXN0-5462]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: go-term
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== Pathways associated ==
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* [[PWY-7210]]
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* [[PWY-7198]]
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* [[PWY-6545]]
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* [[PWY-7184]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=780761}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24931 24931]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=794547}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00782 R00782]
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{{#set: centisome position=16.272814    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Esi_0016_0105|Esi0016_0105|PEX6, PEROXIN 6}}
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{{#set: common name=Pyridoxal phosphate-dependent transferase, major region, subdomain 1}}
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{{#set: reaction associated=ATPASE-RXN|NUCLEOSIDE-TRIPHOSPHATASE-RXN|RXN-12195|RXN-12196|RXN0-5462}}
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{{#set: ec number=EC-4.4.1.1}}
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{{#set: pathway associated=PWY-7210|PWY-7198|PWY-6545|PWY-7184}}
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{{#set: ec number=EC-4.4.1.28}}
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{{#set: gene associated=Ec-12_003100}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:21, 21 March 2018

Gene Ec-17_000870

  • left end position:
    • 780761
  • transcription direction:
    • POSITIVE
  • right end position:
    • 794547
  • centisome position:
    • 16.272814
  • Synonym(s):
    • Esi_0016_0105
    • Esi0016_0105
    • PEX6, PEROXIN 6

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-17_000870&oldid=26374"