Difference between revisions of "Ec-16 003010"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11519 RXN-11519] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With...")
(Created page with "Category:Gene == Gene Ec-16_003010 == * left end position: ** 3186254 * transcription direction: ** NEGATIVE * right end position: ** 3190522 * centisome position: ** 59.6...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11519 RXN-11519] ==
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== Gene Ec-16_003010 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 3186254
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* transcription direction:
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** NEGATIVE
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* right end position:
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** 3190522
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* centisome position:
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** 59.6939   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0030_0077
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** Esi0030_0077
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** CPA
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[BETA-UREIDOPROPIONASE-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[3-7-DIMETHYLXANTHINE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[CPD-12482]][c]
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** Source: [[orthology-aragem]]
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* With common name(s):
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* Reaction: [[N-CARBAMOYLPUTRESCINE-AMIDASE-RXN]]
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** 1 H2O[c] '''+''' 1 theobromine[c] '''+''' 1 oxygen[c] '''=>''' 1 hydrogen peroxide[c] '''+''' 1 3,7-dimethylurate[c]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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== Genes associated with this reaction  ==
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* Reaction: [[RXN-11210]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-20_000230]]
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** [[pantograph]]-[[aragem]]
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* [[Ec-20_000210]]
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** [[pantograph]]-[[aragem]]
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== Pathways  ==
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* [[PWY-6632]], caffeine degradation IV (bacteria, via demethylation and oxidation): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6632 PWY-6632]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
 
** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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== Pathways associated ==
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* [[PWY-43]]
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* [[ARGDEG-III-PWY]]
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* [[PWY-3982]]
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* [[PWY-6430]]
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: left end position=3186254}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07978 R07978]
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{{#set: transcription direction=NEGATIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=3190522}}
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{{#set: gene associated=Ec-20_000230|Ec-20_000210}}
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{{#set: centisome position=59.6939    }}
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{{#set: in pathway=PWY-6632}}
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{{#set: common name=Esi_0030_0077|Esi0030_0077|CPA}}
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{{#set: reconstruction category=orthology}}
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{{#set: reaction associated=BETA-UREIDOPROPIONASE-RXN|N-CARBAMOYLPUTRESCINE-AMIDASE-RXN|RXN-11210}}
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{{#set: reconstruction source=orthology-aragem}}
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{{#set: pathway associated=PWY-43|ARGDEG-III-PWY|PWY-3982|PWY-6430}}
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{{#set: reconstruction tool=pantograph}}
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Latest revision as of 19:22, 21 March 2018

Gene Ec-16_003010

  • left end position:
    • 3186254
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 3190522
  • centisome position:
    • 59.6939
  • Synonym(s):
    • Esi_0030_0077
    • Esi0030_0077
    • CPA

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-16_003010&oldid=26491"