Difference between revisions of "SULFATE-ADENYLYLTRANS-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5144 RXN0-5144] == * direction: ** LEFT-TO-RIGHT * common name: ** tRNA (5-methylaminomethyl-2...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SULFATE-ADENYLYLTRANS-RXN SULFATE-ADENYLYLTRANS-RXN] == * direction: ** REVERSIBLE * common name: *...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5144 RXN0-5144] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SULFATE-ADENYLYLTRANS-RXN SULFATE-ADENYLYLTRANS-RXN] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
+
** Sulphate adenylyltransferase catalytic domain
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.1.1.61 EC-2.1.1.61]
+
** [http://enzyme.expasy.org/EC/2.7.7.4 EC-2.7.7.4]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[tRNA-Containing-5AminoMe-2-ThioUrdines]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[tRNA-Containing-5MeAminoMe-2-ThioU]][c] '''+''' 1 [[PROTON]][c]
+
** 1 [[SULFATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ATP]][c] '''<=>''' 1 [[APS]][c] '''+''' 1 [[PPI]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a 5-aminomethyl-2-thiouridine in tRNA[c] '''+''' 1 S-adenosyl-L-methionine[c] '''=>''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 a 5-methylaminomethyl-2-thiouridine in tRNA[c] '''+''' 1 H+[c]
+
** 1 sulfate[c] '''+''' 1 H+[c] '''+''' 1 ATP[c] '''<=>''' 1 adenosine 5'-phosphosulfate[c] '''+''' 1 diphosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-26_004980]]
+
* Gene: [[Ec-02_000870]]
−
** ESILICULOSUS_GENOME
+
** Source: [[orthology-aragem]]
−
***GO-TERM
+
* Gene: [[Ec-12_000240]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
 +
* [[DISSULFRED-PWY]], sulfate reduction IV (dissimilatory): [http://metacyc.org/META/NEW-IMAGE?object=DISSULFRED-PWY DISSULFRED-PWY]
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-5340]], sulfate activation for sulfonation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5340 PWY-5340]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-5278]], sulfite oxidation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5278 PWY-5278]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[SULFMETII-PWY]], sulfate reduction II (assimilatory): [http://metacyc.org/META/NEW-IMAGE?object=SULFMETII-PWY SULFMETII-PWY]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6683]], sulfate reduction III (assimilatory): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6683 PWY-6683]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[P224-PWY]], sulfate reduction V (dissimilatory): [http://metacyc.org/META/NEW-IMAGE?object=P224-PWY P224-PWY]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-aragem]]
 +
*** Tool: [[pantograph]]
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18133 18133]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00601 R00601]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00529 R00529]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/Q9PJ66 Q9PJ66]
+
** [http://www.uniprot.org/uniprot/Q12650 Q12650]
−
{{#set: direction=LEFT-TO-RIGHT}}
+
** [http://www.uniprot.org/uniprot/O33581 O33581]
−
{{#set: common name=tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase}}
+
** [http://www.uniprot.org/uniprot/O34764 O34764]
−
{{#set: ec number=EC-2.1.1.61}}
+
** [http://www.uniprot.org/uniprot/Q10600 Q10600]
−
{{#set: gene associated=Ec-26_004980}}
+
** [http://www.uniprot.org/uniprot/O67174 O67174]
−
{{#set: in pathway=}}
+
** [http://www.uniprot.org/uniprot/P21156 P21156]
−
{{#set: reconstruction category=annotation}}
+
** [http://www.uniprot.org/uniprot/O23324 O23324]
−
{{#set: reconstruction source=annotation-esiliculosus_genome}}
+
** [http://www.uniprot.org/uniprot/Q9JUD7 Q9JUD7]
−
{{#set: reconstruction tool=pathwaytools}}
+
** [http://www.uniprot.org/uniprot/Q9PM66 Q9PM66]
 +
** [http://www.uniprot.org/uniprot/Q9JUD6 Q9JUD6]
 +
** [http://www.uniprot.org/uniprot/P28604 P28604]
 +
** [http://www.uniprot.org/uniprot/Q27128 Q27128]
 +
** [http://www.uniprot.org/uniprot/P23845 P23845]
 +
** [http://www.uniprot.org/uniprot/O43252 O43252]
 +
** [http://www.uniprot.org/uniprot/Q43170 Q43170]
 +
** [http://www.uniprot.org/uniprot/Q43183 Q43183]
 +
** [http://www.uniprot.org/uniprot/Q43870 Q43870]
 +
** [http://www.uniprot.org/uniprot/Q12555 Q12555]
 +
** [http://www.uniprot.org/uniprot/P08536 P08536]
 +
** [http://www.uniprot.org/uniprot/P74241 P74241]
 +
** [http://www.uniprot.org/uniprot/O48888 O48888]
 +
** [http://www.uniprot.org/uniprot/Q39595 Q39595]
 +
** [http://www.uniprot.org/uniprot/Q96349 Q96349]
 +
** [http://www.uniprot.org/uniprot/Q96541 Q96541]
 +
** [http://www.uniprot.org/uniprot/Q9S7D8 Q9S7D8]
 +
** [http://www.uniprot.org/uniprot/P13441 P13441]
 +
** [http://www.uniprot.org/uniprot/P13442 P13442]
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=Sulphate adenylyltransferase catalytic domain}}
 +
{{#set: ec number=EC-2.7.7.4}}
 +
{{#set: gene associated=Ec-02_000870|Ec-12_000240}}
 +
{{#set: in pathway=DISSULFRED-PWY|PWY-5340|PWY-5278|SULFMETII-PWY|PWY-6683|P224-PWY}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:23, 21 March 2018

Reaction SULFATE-ADENYLYLTRANS-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • Sulphate adenylyltransferase catalytic domain
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 sulfate[c] + 1 H+[c] + 1 ATP[c] <=> 1 adenosine 5'-phosphosulfate[c] + 1 diphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • DISSULFRED-PWY, sulfate reduction IV (dissimilatory): DISSULFRED-PWY
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-5340, sulfate activation for sulfonation: PWY-5340
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-5278, sulfite oxidation III: PWY-5278
    • 2 reactions found over 2 reactions in the full pathway
  • SULFMETII-PWY, sulfate reduction II (assimilatory): SULFMETII-PWY
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-6683, sulfate reduction III (assimilatory): PWY-6683
    • 2 reactions found over 3 reactions in the full pathway
  • P224-PWY, sulfate reduction V (dissimilatory): P224-PWY
    • 2 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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