Difference between revisions of "CHLOROPHYLL-SYN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.3.7.3-RXN 1.3.7.3-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Ferredoxin-dependent bi...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=CHLOROPHYLL-SYN CHLOROPHYLL-SYN] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=T...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.3.7.3-RXN 1.3.7.3-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=CHLOROPHYLL-SYN CHLOROPHYLL-SYN] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2763 TAX-2763]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33682 TAX-33682]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
 
* common name:
 
* common name:
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** Ferredoxin-dependent bilin reductase
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** 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent)
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* ec number:
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** [http://enzyme.expasy.org/EC/1.3.7.3 EC-1.3.7.3]
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* Synonym(s):
 
* Synonym(s):
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** light-dependent aerobic 3,8-divinyl-chlorophyllide a biosynthesis I
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''6''' reactions found over '''9''' reactions in the full pathway
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** 1 [[1516-DIHYDROBILIVERDIN]][c] '''+''' 2 [[Reduced-ferredoxins]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[3Z-PHYCOERYTHROBILIN]][c] '''+''' 2 [[Oxidized-ferredoxins]][c]
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* [[PROTOPORGENOXI-RXN]]
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* With common name(s):
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** 1 associated gene(s):
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** 1 15,16-dihydrobiliverdin[c] '''+''' 2 a reduced ferredoxin [iron-sulfur] cluster[c] '''+''' 2 H+[c] '''=>''' 1 (3Z)-phycoerythrobilin[c] '''+''' 2 an oxidized ferredoxin [iron-sulfur] cluster[c]
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*** [[Ec-25_003100]]
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** 2 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[annotation-esiliculosus_genome]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-aragem]]
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* [[Ec-22_000060]]
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* [[RXN-5285]]
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** ESILICULOSUS_GENOME
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** 1 associated gene(s):
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***EC-NUMBER
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*** [[Ec-20_003900]]
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== Pathways  ==
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** 1 reconstruction source(s) associated:
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* [[PWY-7579]], phycourobilin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7579 PWY-7579]
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*** [[annotation-esiliculosus_genome]]
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** '''1''' reactions found over '''5''' reactions in the full pathway
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* [[RXN-MG-PROTOPORPHYRIN-METHYLESTER-SYN]]
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* [[PWY-5915]], phycoerythrobilin biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5915 PWY-5915]
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** 1 associated gene(s):
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** '''1''' reactions found over '''4''' reactions in the full pathway
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*** [[Ec-01_007810]]
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== Reconstruction information  ==
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** 1 reconstruction source(s) associated:
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* Category: [[annotation]]
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*** [[annotation-esiliculosus_genome]]
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** Source: [[annotation-esiliculosus_genome]]
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* [[RXN0-1461]]
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*** Tool: [[pathwaytools]]
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** 2 associated gene(s):
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*** [[Ec-08_001470]]
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*** [[Ec-19_005390]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[RXN1F-20]]
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** 3 associated gene(s):
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*** [[Ec-14_006490]]
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*** [[Ec-02_001580]]
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*** [[Ec-01_002840]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[UROGENDECARBOX-RXN]]
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** 3 associated gene(s):
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*** [[Ec-24_000620]]
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*** [[Ec-01_000360]]
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*** [[Ec-24_000650]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-5282 RXN-5282]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-5283 RXN-5283]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-5284 RXN-5284]
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-2763}}
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** [http://www.genome.jp/dbget-bin/www_bget?R05819 R05819]
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{{#set: taxonomic range=TAX-33682}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: common name=Ferredoxin-dependent bilin reductase}}
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{{#set: taxonomic range=TAX-33090}}
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{{#set: ec number=EC-1.3.7.3}}
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{{#set: common name=3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent)}}
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{{#set: gene associated=Ec-22_000060}}
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{{#set: common name=light-dependent aerobic 3,8-divinyl-chlorophyllide a biosynthesis I}}
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{{#set: in pathway=PWY-7579|PWY-5915}}
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{{#set: reaction found=6}}
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{{#set: reconstruction category=annotation}}
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{{#set: total reaction=9}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: completion rate=67.0}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:23, 21 March 2018

Pathway CHLOROPHYLL-SYN

  • taxonomic range:
  • common name:
    • 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent)
  • Synonym(s):
    • light-dependent aerobic 3,8-divinyl-chlorophyllide a biosynthesis I

Reaction(s) found

6 reactions found over 9 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=CHLOROPHYLL-SYN&oldid=26610"