Difference between revisions of "PWY-5408"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11989 RXN-11989] == * direction: ** LEFT-TO-RIGHT * common name: ** Carotenoid oxygenase * ec n...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5408 PWY-5408] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-3...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11989 RXN-11989] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5408 PWY-5408] ==
* direction:
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* taxonomic range:
** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
 
* common name:
 
* common name:
** Carotenoid oxygenase
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** 9-lipoxygenase and 9-hydroperoxide lyase pathway
* ec number:
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** [http://enzyme.expasy.org/EC/1.13.11.59 EC-1.13.11.59]
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* Synonym(s):
 
* Synonym(s):
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** 9-LOX and 9-HPL pathway
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** 9-oxo-nonanoate biosynthesis
  
== Reaction Formula ==
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== Reaction(s) found ==
* With identifiers:
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'''1''' reactions found over '''4''' reactions in the full pathway
** 1 [[CPD-7953]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[PRENAL]][c] '''+''' 1 [[CPD-12935]][c]
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* [[RXN-8497]]
* With common name(s):
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** 4 associated gene(s):
** 1 torulene[c] '''+''' 1 oxygen[c] '''=>''' 1 3-methyl-2-butenal[c] '''+''' 1 4'-apo-β-carotenal[c]
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*** [[Ec-03_000010]]
 
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*** [[Ec-20_003630]]
== Genes associated with this reaction  ==
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*** [[Ec-20_003620]]
Genes have been associated with this reaction based on different elements listed below.
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*** [[Ec-03_000020]]
* [[Ec-21_004930]]
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** 1 reconstruction source(s) associated:
** ESILICULOSUS_GENOME
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*** [[orthology-aragem]]
***AUTOMATED-NAME-MATCH
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== Reaction(s) not found ==
* [[Ec-20_002250]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8495 RXN-8495]
** ESILICULOSUS_GENOME
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8502 RXN-8502]
***AUTOMATED-NAME-MATCH
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8503 RXN-8503]
* [[Ec-06_002830]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-18_002140]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-06_002810]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY-6681]], neurosporaxanthin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6681 PWY-6681]
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** '''2''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
* RHEA:
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{{#set: taxonomic range=TAX-33090}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31522 31522]
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{{#set: common name=9-lipoxygenase and 9-hydroperoxide lyase pathway}}
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=9-LOX and 9-HPL pathway|9-oxo-nonanoate biosynthesis}}
{{#set: common name=Carotenoid oxygenase}}
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{{#set: reaction found=1}}
{{#set: ec number=EC-1.13.11.59}}
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{{#set: total reaction=4}}
{{#set: gene associated=Ec-21_004930|Ec-20_002250|Ec-06_002830|Ec-18_002140|Ec-06_002810}}
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{{#set: completion rate=25.0}}
{{#set: in pathway=PWY-6681}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:24, 21 March 2018

Pathway PWY-5408

  • taxonomic range:
  • common name:
    • 9-lipoxygenase and 9-hydroperoxide lyase pathway
  • Synonym(s):
    • 9-LOX and 9-HPL pathway
    • 9-oxo-nonanoate biosynthesis

Reaction(s) found

1 reactions found over 4 reactions in the full pathway

Reaction(s) not found

External links