Difference between revisions of "PWY-5875"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GSAAMINOTRANS-RXN GSAAMINOTRANS-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** glutamate-1...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5875 PWY-5875] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1239 TAX-12...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GSAAMINOTRANS-RXN GSAAMINOTRANS-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5875 PWY-5875] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1239 TAX-1239]
 
* common name:
 
* common name:
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** glutamate-1-semialdehyde 2,1-aminomutase, putative chloroplast precursor
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** staphyloxanthin biosynthesis
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* ec number:
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** [http://enzyme.expasy.org/EC/5.4.3.8 EC-5.4.3.8]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''1''' reactions found over '''9''' reactions in the full pathway
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** 1 [[GLUTAMATE-1-SEMIALDEHYDE]][c] '''=>''' 1 [[5-AMINO-LEVULINATE]][c]
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* [[RXN-12263]]
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* With common name(s):
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** 1 associated gene(s):
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** 1 (S)-4-amino-5-oxopentanoate[c] '''=>''' 1 5-aminolevulinate[c]
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*** [[Ec-11_001030]]
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** 2 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[annotation-esiliculosus_genome]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-aragem]]
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* [[Ec-12_008690]]
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== Reaction(s) not found ==
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** ESILICULOSUS_GENOME
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9301 RXN-9301]
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***EC-NUMBER
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9303 RXN-9303]
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** [[pantograph]]-[[aragem]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9304 RXN-9304]
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== Pathways  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9305 RXN-9305]
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* [[PWY-5188]], tetrapyrrole biosynthesis I (from glutamate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5188 PWY-5188]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9306 RXN-9306]
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** '''6''' reactions found over '''6''' reactions in the full pathway
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9307 RXN-9307]
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== Reconstruction information  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9308 RXN-9308]
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* Category: [[orthology]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9309 RXN-9309]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* LIGAND-MAP:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14265 14265]
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** [http://www.genome.jp/dbget-bin/www_bget?map00906 map00906]
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-1239}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02272 R02272]
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{{#set: common name=staphyloxanthin biosynthesis}}
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* UNIPROT:
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{{#set: reaction found=1}}
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** [http://www.uniprot.org/uniprot/P18492 P18492]
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{{#set: total reaction=9}}
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** [http://www.uniprot.org/uniprot/P21267 P21267]
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{{#set: completion rate=11.0}}
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** [http://www.uniprot.org/uniprot/Q06741 Q06741]
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** [http://www.uniprot.org/uniprot/Q06774 Q06774]
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** [http://www.uniprot.org/uniprot/P23893 P23893]
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** [http://www.uniprot.org/uniprot/O26330 O26330]
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** [http://www.uniprot.org/uniprot/P30949 P30949]
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** [http://www.uniprot.org/uniprot/Q9PP70 Q9PP70]
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** [http://www.uniprot.org/uniprot/Q9JW10 Q9JW10]
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** [http://www.uniprot.org/uniprot/O29027 O29027]
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** [http://www.uniprot.org/uniprot/P45621 P45621]
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** [http://www.uniprot.org/uniprot/P24630 P24630]
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** [http://www.uniprot.org/uniprot/P31593 P31593]
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** [http://www.uniprot.org/uniprot/Q39566 Q39566]
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** [http://www.uniprot.org/uniprot/P48247 P48247]
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** [http://www.uniprot.org/uniprot/P46716 P46716]
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** [http://www.uniprot.org/uniprot/Q40147 Q40147]
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** [http://www.uniprot.org/uniprot/O74061 O74061]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=glutamate-1-semialdehyde 2,1-aminomutase, putative chloroplast precursor}}
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{{#set: ec number=EC-5.4.3.8}}
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{{#set: gene associated=Ec-12_008690}}
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{{#set: in pathway=PWY-5188}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 19:24, 21 March 2018

Pathway PWY-5875

  • taxonomic range:
  • common name:
    • staphyloxanthin biosynthesis
  • Synonym(s):

Reaction(s) found

1 reactions found over 9 reactions in the full pathway

Reaction(s) not found

External links



Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PWY-5875&oldid=26625"