Difference between revisions of "CPD-13187"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-4981 PWY-4981] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-27...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-13187 CPD-13187] == * smiles: ** CC2(OC(OC1(C(O)C(O)OC(CO)C(O)1))C(O)C(O)C2OC3(OC(CO)C(C(O)...")
 
(One intermediate revision by the same user not shown)
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[[Category:Pathway]]
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[[Category:Metabolite]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-4981 PWY-4981] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-13187 CPD-13187] ==
* taxonomic range:
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* smiles:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
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** CC2(OC(OC1(C(O)C(O)OC(CO)C(O)1))C(O)C(O)C2OC3(OC(CO)C(C(O)C(O)3)OC4(OC(C([O-])=O)=CC(O)C(O)4)))
 +
* inchi key:
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** InChIKey=JMDPLHPAGLYHCI-DPADXCMISA-M
 
* common name:
 
* common name:
** L-proline biosynthesis II (from arginine)
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** unsaturated gellan tetrasaccharide
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* molecular weight:
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** 645.544   
 
* Synonym(s):
 
* Synonym(s):
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** β-D-4-deoxy-Δ4,5-GlcAp-(1→4)-β-D-Glcp-(1→4)-α-L-Rhap-(1→3)-β-D-Glcp
  
== Reaction(s) found ==
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== Reaction(s) known to consume the compound ==
'''4''' reactions found over '''6''' reactions in the full pathway
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* [[RXN-12270]]
* [[ORNCARBAMTRANSFER-RXN]]
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== Reaction(s) known to produce the compound ==
** 1 associated gene(s):
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== Reaction(s) of unknown directionality ==
*** [[Ec-00_004630]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[ORNITHINE-GLU-AMINOTRANSFERASE-RXN]]
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** 1 associated gene(s):
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*** [[Ec-21_003730]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[PYRROLINECARBREDUCT-RXN]]
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** 5 associated gene(s):
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*** [[Ec-05_006410]]
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*** [[Ec-07_007350]]
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*** [[Ec-07_007360]]
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*** [[Ec-07_007340]]
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*** [[Ec-03_004680]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[SPONTPRO-RXN]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=ARGININE-DEIMINASE-RXN ARGININE-DEIMINASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=CITRULLINASE-RXN CITRULLINASE-RXN]
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== External links  ==
 
== External links  ==
{{#set: taxonomic range=TAX-2759}}
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* PUBCHEM:
{{#set: common name=L-proline biosynthesis II (from arginine)}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=52940141 52940141]
{{#set: reaction found=4}}
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* CHEBI:
{{#set: total reaction=6}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=63254 63254]
{{#set: completion rate=67.0}}
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{{#set: smiles=CC2(OC(OC1(C(O)C(O)OC(CO)C(O)1))C(O)C(O)C2OC3(OC(CO)C(C(O)C(O)3)OC4(OC(C([O-])=O)=CC(O)C(O)4)))}}
 +
{{#set: inchi key=InChIKey=JMDPLHPAGLYHCI-DPADXCMISA-M}}
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{{#set: common name=unsaturated gellan tetrasaccharide}}
 +
{{#set: molecular weight=645.544    }}
 +
{{#set: common name=β-D-4-deoxy-Δ4,5-GlcAp-(1→4)-β-D-Glcp-(1→4)-α-L-Rhap-(1→3)-β-D-Glcp}}
 +
{{#set: consumed by=RXN-12270}}

Latest revision as of 19:24, 21 March 2018

Metabolite CPD-13187

  • smiles:
    • CC2(OC(OC1(C(O)C(O)OC(CO)C(O)1))C(O)C(O)C2OC3(OC(CO)C(C(O)C(O)3)OC4(OC(C([O-])=O)=CC(O)C(O)4)))
  • inchi key:
    • InChIKey=JMDPLHPAGLYHCI-DPADXCMISA-M
  • common name:
    • unsaturated gellan tetrasaccharide
  • molecular weight:
    • 645.544
  • Synonym(s):
    • β-D-4-deoxy-Δ4,5-GlcAp-(1→4)-β-D-Glcp-(1→4)-α-L-Rhap-(1→3)-β-D-Glcp

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"CC2(OC(OC1(C(O)C(O)OC(CO)C(O)1))C(O)C(O)C2OC3(OC(CO)C(C(O)C(O)3)OC4(OC(C([O-])=O)=CC(O)C(O)4)))" cannot be used as a page name in this wiki.