Difference between revisions of "6.3.4.11-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12747 RXN-12747] == * direction: ** LEFT-TO-RIGHT * common name: ** 5-hydroxy-3-[(3aS,4S,5R,7aS...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=6.3.4.11-RXN 6.3.4.11-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Biotin/lipoate A/B pr...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12747 RXN-12747] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=6.3.4.11-RXN 6.3.4.11-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** 5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA 5-dehydrogenase
+
** Biotin/lipoate A/B protein ligase
−
** 3-beta-hydroxy-delta5-steroid dehydrogenase
+
** Biotin/lipoate A/B protein ligase family
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.1.1.145 EC-1.1.1.145]
+
** [http://enzyme.expasy.org/EC/6.3.4.11 EC-6.3.4.11]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[NADPH]][c] '''+''' 1 [[CPD-13754]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD-13755]][c] '''+''' 1 [[NADP]][c]
+
** 1 [[Apo-3-methylcrotonoyl-CoA-carbon-dioxide]][c] '''+''' 1 [[BIOTIN]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[3-methylcrotonoyl-CoA-carbon-dioxide]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 NADPH[c] '''+''' 1 3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA[c] '''+''' 1 H+[c] '''=>''' 1 5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA[c] '''+''' 1 NADP+[c]
+
** 1 an apo-[3-methylcrotonoyl-CoA:carbon-dioxide ligase (ADP-forming)][c] '''+''' 1 biotin[c] '''+''' 1 ATP[c] '''=>''' 1 diphosphate[c] '''+''' 1 AMP[c] '''+''' 1 a holo-[3-methylcrotonoyl-CoA:carbon-dioxide ligase (ADP-forming)][c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-21_001850]]
+
* Gene: [[Ec-05_005190]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***GO-TERM
+
*** Assignment: AUTOMATED-NAME-MATCH
−
* [[Ec-15_000670]]
+
* Gene: [[Ec-00_003530]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***GO-TERM
+
*** Assignment: AUTOMATED-NAME-MATCH
−
* [[Ec-06_002740]]
+
* Gene: [[Ec-01_008620]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***GO-TERM
+
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-11_004970]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6944]], androstenedione degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6944 PWY-6944]
 
−
** '''2''' reactions found over '''15''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
Line 35: Line 36:
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R04604 R04604]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA 5-dehydrogenase}}
+
{{#set: common name=Biotin/lipoate A/B protein ligase}}
−
{{#set: common name=3-beta-hydroxy-delta5-steroid dehydrogenase}}
+
{{#set: common name=Biotin/lipoate A/B protein ligase family}}
−
{{#set: ec number=EC-1.1.1.145}}
+
{{#set: ec number=EC-6.3.4.11}}
−
{{#set: gene associated=Ec-21_001850|Ec-15_000670|Ec-06_002740}}
+
{{#set: gene associated=Ec-05_005190|Ec-00_003530|Ec-01_008620|Ec-11_004970}}
−
{{#set: in pathway=PWY-6944}}
+
{{#set: in pathway=}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:24, 21 March 2018

Reaction 6.3.4.11-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Biotin/lipoate A/B protein ligase
    • Biotin/lipoate A/B protein ligase family
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=6.3.4.11-RXN&oldid=26719"