Difference between revisions of "PRAISOM-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12789 RXN-12789] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-beta-hydroxy-delta5-stero...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PRAISOM-RXN PRAISOM-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Indole-3-glycerol phosp...") |
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[[Category:Reaction]] | [[Category:Reaction]] | ||
− | == Reaction [http://metacyc.org/META/NEW-IMAGE?object= | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PRAISOM-RXN PRAISOM-RXN] == |
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
* common name: | * common name: | ||
− | ** 3- | + | ** Indole-3-glycerol phosphate synthase |
* ec number: | * ec number: | ||
− | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/5.3.1.24 EC-5.3.1.24] |
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
− | ** 1 [[ | + | ** 1 [[N-5-PHOSPHORIBOSYL-ANTHRANILATE]][c] '''=>''' 1 [[CARBOXYPHENYLAMINO-DEOXYRIBULOSE-P]][c] |
* With common name(s): | * With common name(s): | ||
− | ** 1 | + | ** 1 N-(5-phosphoribosyl)-anthranilate[c] '''=>''' 1 1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
− | * [[Ec- | + | * Gene: [[Ec-08_003020]] |
− | ** | + | ** Source: [[annotation-esiliculosus_genome]] |
− | + | *** Assignment: EC-NUMBER | |
− | + | ** Source: [[orthology-aragem]] | |
− | ** | + | |
− | * | + | |
− | * [[ | + | |
− | + | ||
− | + | ||
== Pathways == | == Pathways == | ||
− | * [[ | + | * [[TRPSYN-PWY]], L-tryptophan biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=TRPSYN-PWY TRPSYN-PWY] |
− | ** ''' | + | ** '''6''' reactions found over '''6''' reactions in the full pathway |
== Reconstruction information == | == Reconstruction information == | ||
+ | * Category: [[orthology]] | ||
+ | ** Source: [[orthology-aragem]] | ||
+ | *** Tool: [[pantograph]] | ||
* Category: [[annotation]] | * Category: [[annotation]] | ||
** Source: [[annotation-esiliculosus_genome]] | ** Source: [[annotation-esiliculosus_genome]] | ||
*** Tool: [[pathwaytools]] | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
+ | * RHEA: | ||
+ | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21540 21540] | ||
+ | * LIGAND-RXN: | ||
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R03509 R03509] | ||
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/P16923 P16923] | ||
+ | ** [http://www.uniprot.org/uniprot/O67853 O67853] | ||
+ | ** [http://www.uniprot.org/uniprot/P12289 P12289] | ||
+ | ** [http://www.uniprot.org/uniprot/P42393 P42393] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9PIF3 Q9PIF3] | ||
+ | ** [http://www.uniprot.org/uniprot/Q57893 Q57893] | ||
+ | ** [http://www.uniprot.org/uniprot/P20167 P20167] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9JVD1 Q9JVD1] | ||
+ | ** [http://www.uniprot.org/uniprot/P00910 P00910] | ||
+ | ** [http://www.uniprot.org/uniprot/P00909 P00909] | ||
+ | ** [http://www.uniprot.org/uniprot/P00912 P00912] | ||
+ | ** [http://www.uniprot.org/uniprot/P13997 P13997] | ||
+ | ** [http://www.uniprot.org/uniprot/P50857 P50857] | ||
+ | ** [http://www.uniprot.org/uniprot/P27710 P27710] | ||
+ | ** [http://www.uniprot.org/uniprot/P17218 P17218] | ||
+ | ** [http://www.uniprot.org/uniprot/P00908 P00908] | ||
+ | ** [http://www.uniprot.org/uniprot/P18483 P18483] | ||
+ | ** [http://www.uniprot.org/uniprot/Q02002 Q02002] | ||
+ | ** [http://www.uniprot.org/uniprot/Q56320 Q56320] | ||
+ | ** [http://www.uniprot.org/uniprot/Q01128 Q01128] | ||
+ | ** [http://www.uniprot.org/uniprot/P74435 P74435] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9YGB1 Q9YGB1] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
− | {{#set: common name=3- | + | {{#set: common name=Indole-3-glycerol phosphate synthase}} |
− | {{#set: ec number=EC- | + | {{#set: ec number=EC-5.3.1.24}} |
− | {{#set: gene associated=Ec- | + | {{#set: gene associated=Ec-08_003020}} |
− | {{#set: in pathway= | + | {{#set: in pathway=TRPSYN-PWY}} |
− | {{#set: reconstruction category=annotation}} | + | {{#set: reconstruction category=orthology|annotation}} |
− | {{#set: reconstruction source=annotation-esiliculosus_genome}} | + | {{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}} |
− | {{#set: reconstruction tool=pathwaytools}} | + | {{#set: reconstruction tool=pantograph|pathwaytools}} |
Latest revision as of 19:24, 21 March 2018
Contents
Reaction PRAISOM-RXN
- direction:
- LEFT-TO-RIGHT
- common name:
- Indole-3-glycerol phosphate synthase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1 N-(5-phosphoribosyl)-anthranilate[c] => 1 1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Ec-08_003020
- Source: annotation-esiliculosus_genome
- Assignment: EC-NUMBER
- Source: orthology-aragem
- Source: annotation-esiliculosus_genome
Pathways
- TRPSYN-PWY, L-tryptophan biosynthesis: TRPSYN-PWY
- 6 reactions found over 6 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-aragem
- Tool: pantograph
- Source: orthology-aragem
- Category: annotation
- Source: annotation-esiliculosus_genome
- Tool: pathwaytools
- Source: annotation-esiliculosus_genome
External links
- RHEA:
- LIGAND-RXN:
- UNIPROT: