Difference between revisions of "TRANSALDOL-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7007 PWY-7007] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-27...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRANSALDOL-RXN TRANSALDOL-RXN] == * direction: ** REVERSIBLE * common name: ** Transaldolase * ec n...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Pathway]]
+
[[Category:Reaction]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7007 PWY-7007] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRANSALDOL-RXN TRANSALDOL-RXN] ==
−
* taxonomic range:
+
* direction:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
+
** REVERSIBLE
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
+
 
* common name:
 
* common name:
−
** methyl ketone biosynthesis (engineered)
+
** Transaldolase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/2.2.1.2 EC-2.2.1.2]
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction(s) found ==
+
== Reaction Formula ==
−
'''3''' reactions found over '''6''' reactions in the full pathway
+
* With identifiers:
−
* [[ACYL-COA-OXIDASE-RXN]]
+
** 1 [[D-SEDOHEPTULOSE-7-P]][c] '''+''' 1 [[GAP]][c] '''<=>''' 1 [[FRUCTOSE-6P]][c] '''+''' 1 [[ERYTHROSE-4P]][c]
−
** 3 associated gene(s):
+
* With common name(s):
−
*** [[Ec-08_006390]]
+
** 1 D-sedoheptulose 7-phosphate[c] '''+''' 1 D-glyceraldehyde 3-phosphate[c] '''<=>''' 1 &beta;-D-fructofuranose 6-phosphate[c] '''+''' 1 D-erythrose 4-phosphate[c]
−
*** [[Ec-26_004320]]
+
 
−
*** [[Ec-22_002920]]
+
== Genes associated with this reaction  ==
−
** 1 reconstruction source(s) associated:
+
Genes have been associated with this reaction based on different elements listed below.
−
*** [[annotation-esiliculosus_genome]]
+
* Gene: [[Ec-06_003940]]
−
* [[ENOYL-COA-HYDRAT-RXN]]
+
** Source: [[annotation-esiliculosus_genome]]
−
** 4 associated gene(s):
+
*** Assignment: AUTOMATED-NAME-MATCH
−
*** [[Ec-16_001250]]
+
* Gene: [[Ec-01_002780]]
−
*** [[Ec-06_001380]]
+
** Source: [[orthology-aragem]]
−
*** [[Ec-16_003560]]
+
** Source: [[orthology-aragem]]
−
*** [[Ec-14_006530]]
+
== Pathways  ==
−
** 1 reconstruction source(s) associated:
+
* [[P124-PWY]], Bifidobacterium shunt: [http://metacyc.org/META/NEW-IMAGE?object=P124-PWY P124-PWY]
−
*** [[annotation-esiliculosus_genome]]
+
** '''12''' reactions found over '''15''' reactions in the full pathway
−
* [[OHACYL-COA-DEHYDROG-RXN]]
+
* [[P185-PWY]], formaldehyde assimilation III (dihydroxyacetone cycle): [http://metacyc.org/META/NEW-IMAGE?object=P185-PWY P185-PWY]
−
** 2 associated gene(s):
+
** '''11''' reactions found over '''12''' reactions in the full pathway
−
*** [[Ec-19_005290]]
+
* [[PWY-5723]], Rubisco shunt: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5723 PWY-5723]
−
*** [[Ec-14_006530]]
+
** '''10''' reactions found over '''10''' reactions in the full pathway
−
** 1 reconstruction source(s) associated:
+
* [[PWY-1861]], formaldehyde assimilation II (RuMP Cycle): [http://metacyc.org/META/NEW-IMAGE?object=PWY-1861 PWY-1861]
−
*** [[annotation-esiliculosus_genome]]
+
** '''7''' reactions found over '''9''' reactions in the full pathway
−
== Reaction(s) not found ==
+
* [[NONOXIPENT-PWY]], pentose phosphate pathway (non-oxidative branch): [http://metacyc.org/META/NEW-IMAGE?object=NONOXIPENT-PWY NONOXIPENT-PWY]
−
* [http://metacyc.org/META/NEW-IMAGE?object=BUTYRATE--COA-LIGASE-RXN BUTYRATE--COA-LIGASE-RXN]
+
** '''5''' reactions found over '''5''' reactions in the full pathway
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13247 RXN-13247]
+
== Reconstruction information  ==
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13248 RXN-13248]
+
* Category: [[orthology]]
 +
** Source: [[orthology-aragem]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-2759}}
+
* RHEA:
−
{{#set: taxonomic range=TAX-2}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17053 17053]
−
{{#set: common name=methyl ketone biosynthesis (engineered)}}
+
* LIGAND-RXN:
−
{{#set: reaction found=3}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R01827 R01827]
−
{{#set: total reaction=6}}
+
* UNIPROT:
−
{{#set: completion rate=50.0}}
+
** [http://www.uniprot.org/uniprot/P17441 P17441]
 +
** [http://www.uniprot.org/uniprot/P17440 P17440]
 +
** [http://www.uniprot.org/uniprot/P37837 P37837]
 +
** [http://www.uniprot.org/uniprot/P45055 P45055]
 +
** [http://www.uniprot.org/uniprot/Q9JSU1 Q9JSU1]
 +
** [http://www.uniprot.org/uniprot/P0A867 P0A867]
 +
** [http://www.uniprot.org/uniprot/Q9PIL5 Q9PIL5]
 +
** [http://www.uniprot.org/uniprot/Q58370 Q58370]
 +
** [http://www.uniprot.org/uniprot/P34214 P34214]
 +
** [http://www.uniprot.org/uniprot/P0A870 P0A870]
 +
** [http://www.uniprot.org/uniprot/P15019 P15019]
 +
** [http://www.uniprot.org/uniprot/P53228 P53228]
 +
** [http://www.uniprot.org/uniprot/P51778 P51778]
 +
** [http://www.uniprot.org/uniprot/P72797 P72797]
 +
** [http://www.uniprot.org/uniprot/O04894 O04894]
 +
** [http://www.uniprot.org/uniprot/P78865 P78865]
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=Transaldolase}}
 +
{{#set: ec number=EC-2.2.1.2}}
 +
{{#set: gene associated=Ec-06_003940|Ec-01_002780}}
 +
{{#set: in pathway=P124-PWY|P185-PWY|PWY-5723|PWY-1861|NONOXIPENT-PWY}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:26, 21 March 2018

Reaction TRANSALDOL-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • Transaldolase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 D-sedoheptulose 7-phosphate[c] + 1 D-glyceraldehyde 3-phosphate[c] <=> 1 β-D-fructofuranose 6-phosphate[c] + 1 D-erythrose 4-phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • P124-PWY, Bifidobacterium shunt: P124-PWY
    • 12 reactions found over 15 reactions in the full pathway
  • P185-PWY, formaldehyde assimilation III (dihydroxyacetone cycle): P185-PWY
    • 11 reactions found over 12 reactions in the full pathway
  • PWY-5723, Rubisco shunt: PWY-5723
    • 10 reactions found over 10 reactions in the full pathway
  • PWY-1861, formaldehyde assimilation II (RuMP Cycle): PWY-1861
    • 7 reactions found over 9 reactions in the full pathway
  • NONOXIPENT-PWY, pentose phosphate pathway (non-oxidative branch): NONOXIPENT-PWY
    • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=TRANSALDOL-RXN&oldid=26910"