Difference between revisions of "Ec-21 003740"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-735 PWY-735] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-330...")
(Created page with "Category:Gene == Gene Ec-21_003740 == * left end position: ** 4732928 * transcription direction: ** POSITIVE * right end position: ** 4743041 * centisome position: ** 64.1...")
 
(One intermediate revision by the same user not shown)
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[[Category:Pathway]]
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[[Category:Gene]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-735 PWY-735] ==
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== Gene Ec-21_003740 ==
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* taxonomic range:
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* left end position:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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** 4732928
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* common name:
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* transcription direction:
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** jasmonic acid biosynthesis
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** POSITIVE
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* right end position:
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** 4743041
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* centisome position:
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** 64.13078   
 
* Synonym(s):
 
* Synonym(s):
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** jasmonate biosynthesis
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** Esi_0072_0110
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** Esi0072_0110
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** NFS
  
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== Reaction(s) found ==
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== Reactions associated ==
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'''10''' reactions found over '''19''' reactions in the full pathway
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* Reaction: [[RXN-12587]]
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* [[RXN-10696]]
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** Source: [[annotation-esiliculosus_genome]]
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** 3 associated gene(s):
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*** Assignment: ec-number
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*** [[Ec-22_002920]]
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* Reaction: [[RXN-12588]]
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*** [[Ec-08_006390]]
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** Source: [[annotation-esiliculosus_genome]]
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*** [[Ec-26_004320]]
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*** Assignment: ec-number
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** 1 reconstruction source(s) associated:
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* Reaction: [[RXN-14382]]
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*** [[annotation-esiliculosus_genome]]
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** Source: [[annotation-esiliculosus_genome]]
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* [[RXN-10697]]
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*** Assignment: ec-number
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** 4 associated gene(s):
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* Reaction: [[RXN-14384]]
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*** [[Ec-14_006530]]
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** Source: [[annotation-esiliculosus_genome]]
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*** [[Ec-16_003560]]
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*** Assignment: ec-number
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*** [[Ec-06_001380]]
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* Reaction: [[RXN-14385]]
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*** [[Ec-16_001250]]
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** Source: [[annotation-esiliculosus_genome]]
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** 1 reconstruction source(s) associated:
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*** Assignment: ec-number
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*** [[annotation-esiliculosus_genome]]
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* Reaction: [[RXN-14386]]
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* [[RXN-10698]]
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** Source: [[annotation-esiliculosus_genome]]
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** 2 associated gene(s):
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*** Assignment: ec-number
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*** [[Ec-14_006530]]
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* Reaction: [[RXN-15881]]
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*** [[Ec-19_005290]]
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** Source: [[annotation-esiliculosus_genome]]
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** 1 reconstruction source(s) associated:
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*** Assignment: ec-number
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*** [[annotation-esiliculosus_genome]]
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* Reaction: [[RXN-9787]]
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* [[RXN-10702]]
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** Source: [[annotation-esiliculosus_genome]]
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** 2 associated gene(s):
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*** Assignment: ec-number
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*** [[Ec-19_005290]]
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* Reaction: [[RXN0-308]]
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*** [[Ec-14_006530]]
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** Source: [[annotation-esiliculosus_genome]]
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** 1 reconstruction source(s) associated:
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*** Assignment: ec-number
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*** [[annotation-esiliculosus_genome]]
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== Pathways associated ==
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* [[RXN-10703]]
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* [[PWY0-1021]]
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** 2 associated gene(s):
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* [[PWY-6823]]
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*** [[Ec-14_006530]]
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* [[PWY-7250]]
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*** [[Ec-19_005290]]
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* [[PWY-6892]]
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** 1 reconstruction source(s) associated:
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* [[PWY-6891]]
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*** [[annotation-esiliculosus_genome]]
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* [[RXN-10704]]
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** 4 associated gene(s):
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*** [[Ec-06_001380]]
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*** [[Ec-16_001250]]
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*** [[Ec-14_006530]]
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*** [[Ec-16_003560]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[RXN-10705]]
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** 4 associated gene(s):
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*** [[Ec-14_006530]]
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*** [[Ec-16_001250]]
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*** [[Ec-16_003560]]
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*** [[Ec-06_001380]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[RXN-10706]]
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** 3 associated gene(s):
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*** [[Ec-26_004320]]
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*** [[Ec-08_006390]]
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*** [[Ec-22_002920]]
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** 1 reconstruction source(s) associated:
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−
*** [[annotation-esiliculosus_genome]]
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* [[RXN-10707]]
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** 3 associated gene(s):
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*** [[Ec-08_006390]]
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*** [[Ec-26_004320]]
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*** [[Ec-22_002920]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[RXN-1321]]
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** 4 associated gene(s):
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*** [[Ec-20_003620]]
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*** [[Ec-03_000020]]
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*** [[Ec-03_000010]]
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*** [[Ec-20_003630]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=12-OXOPHYTODIENOATE-REDUCTASE-RXN 12-OXOPHYTODIENOATE-REDUCTASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=ALLENE-OXIDE-CYCLASE-RXN ALLENE-OXIDE-CYCLASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-10695 RXN-10695]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-10699 RXN-10699]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-10700 RXN-10700]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-10701 RXN-10701]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-10708 RXN-10708]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-745 RXN-745]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-19 RXN1F-19]
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== External links  ==
 
== External links  ==
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* ARACYC:
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{{#set: left end position=4732928}}
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** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-735 PWY-735]
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{{#set: transcription direction=POSITIVE}}
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{{#set: taxonomic range=TAX-33090}}
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{{#set: right end position=4743041}}
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{{#set: common name=jasmonic acid biosynthesis}}
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{{#set: centisome position=64.13078    }}
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{{#set: common name=jasmonate biosynthesis}}
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{{#set: common name=Esi_0072_0110|Esi0072_0110|NFS}}
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{{#set: reaction found=10}}
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{{#set: reaction associated=RXN-12587|RXN-12588|RXN-14382|RXN-14384|RXN-14385|RXN-14386|RXN-15881|RXN-9787|RXN0-308}}
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{{#set: total reaction=19}}
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{{#set: pathway associated=PWY0-1021|PWY-6823|PWY-7250|PWY-6892|PWY-6891}}
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{{#set: completion rate=53.0}}
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Latest revision as of 19:26, 21 March 2018

Gene Ec-21_003740

  • left end position:
    • 4732928
  • transcription direction:
    • POSITIVE
  • right end position:
    • 4743041
  • centisome position:
    • 64.13078
  • Synonym(s):
    • Esi_0072_0110
    • Esi0072_0110
    • NFS

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-21_003740&oldid=26920"