Difference between revisions of "PWY-7385"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=MYO-INOSITOL-1OR-4-MONOPHOSPHATASE-RXN MYO-INOSITOL-1OR-4-MONOPHOSPHATASE-RXN] == * direction: ** L...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7385 PWY-7385] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-47...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Pathway]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=MYO-INOSITOL-1OR-4-MONOPHOSPHATASE-RXN MYO-INOSITOL-1OR-4-MONOPHOSPHATASE-RXN] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7385 PWY-7385] ==
−
* direction:
+
* taxonomic range:
−
** LEFT-TO-RIGHT
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
−
** Inositol monophosphatase
+
** 1,3-propanediol biosynthesis (engineered)
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/3.1.3.25 EC-3.1.3.25]
+
 
* Synonym(s):
 
* Synonym(s):
 +
** 1,3-PDO biosynthesis
  
−
== Reaction Formula ==
+
== Reaction(s) found ==
−
* With identifiers:
+
'''5''' reactions found over '''9''' reactions in the full pathway
−
** 1 [[WATER]][c] '''+''' 1 [[1-L-MYO-INOSITOL-1-P]][c] '''=>''' 1 [[MYO-INOSITOL]][c] '''+''' 1 [[Pi]][c]
+
* [[1.1.1.8-RXN]]
−
* With common name(s):
+
** 3 associated gene(s):
−
** 1 H2O[c] '''+''' 1 1D-myo-inositol 3-monophosphate[c] '''=>''' 1 myo-inositol[c] '''+''' 1 phosphate[c]
+
*** [[Ec-19_001930]]
−
 
+
*** [[Ec-19_004200]]
−
== Genes associated with this reaction  ==
+
*** [[Ec-27_006990]]
−
Genes have been associated with this reaction based on different elements listed below.
+
** 1 reconstruction source(s) associated:
−
* [[Ec-10_005870]]
+
*** [[annotation-esiliculosus_genome]]
−
** ESILICULOSUS_GENOME
+
* [[6PFRUCTPHOS-RXN]]
−
***AUTOMATED-NAME-MATCH
+
** 3 associated gene(s):
−
* [[Ec-21_004120]]
+
*** [[Ec-14_003880]]
−
** ESILICULOSUS_GENOME
+
*** [[Ec-22_000070]]
−
***AUTOMATED-NAME-MATCH
+
*** [[Ec-12_002540]]
−
** [[pantograph]]-[[aragem]]
+
** 2 reconstruction source(s) associated:
−
* [[Ec-02_005670]]
+
*** [[annotation-esiliculosus_genome]]
−
** ESILICULOSUS_GENOME
+
*** [[orthology-aragem]]
−
***EC-NUMBER
+
* [[F16ALDOLASE-RXN]]
−
* [[Ec-12_001850]]
+
** 4 associated gene(s):
−
** ESILICULOSUS_GENOME
+
*** [[Ec-10_004980]]
−
***AUTOMATED-NAME-MATCH
+
*** [[Ec-01_008040]]
−
* [[Ec-26_000990]]
+
*** [[Ec-10_000880]]
−
** ESILICULOSUS_GENOME
+
*** [[Ec-14_001680]]
−
***AUTOMATED-NAME-MATCH
+
** 1 reconstruction source(s) associated:
−
* [[Ec-21_001090]]
+
*** [[annotation-esiliculosus_genome]]
−
** ESILICULOSUS_GENOME
+
* [[GLUCOKIN-RXN]]
−
***AUTOMATED-NAME-MATCH
+
** 1 associated gene(s):
−
* [[Ec-15_001780]]
+
*** [[Ec-27_005030]]
−
** ESILICULOSUS_GENOME
+
** 1 reconstruction source(s) associated:
−
***AUTOMATED-NAME-MATCH
+
*** [[annotation-esiliculosus_genome]]
−
* [[Ec-04_000760]]
+
* [[PGLUCISOM-RXN]]
−
** ESILICULOSUS_GENOME
+
** 3 associated gene(s):
−
***AUTOMATED-NAME-MATCH
+
*** [[Ec-24_002470]]
−
* [[Ec-14_006130]]
+
*** [[Ec-13_003530]]
−
** ESILICULOSUS_GENOME
+
*** [[Ec-13_003810]]
−
***AUTOMATED-NAME-MATCH
+
** 1 reconstruction source(s) associated:
−
== Pathways  ==
+
*** [[annotation-esiliculosus_genome]]
−
* [[PWY-2301]], myo-inositol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2301 PWY-2301]
+
== Reaction(s) not found ==
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
* [http://metacyc.org/META/NEW-IMAGE?object=GLYCEROL-DEHYDRATASE-RXN GLYCEROL-DEHYDRATASE-RXN]
−
== Reconstruction information  ==
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14965 RXN-14965]
−
* Category: [[orthology]]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN0-6487 RXN0-6487]
−
** Source: [[orthology-aragem]]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN0-7077 RXN0-7077]
−
*** Tool: [[pantograph]]
+
−
* Category: [[annotation]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Tool: [[pathwaytools]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: taxonomic range=TAX-4751}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30742 30742]
+
{{#set: taxonomic range=TAX-2}}
−
* LIGAND-RXN:
+
{{#set: common name=1,3-propanediol biosynthesis (engineered)}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R01187 R01187]
+
{{#set: common name=1,3-PDO biosynthesis}}
−
* UNIPROT:
+
{{#set: reaction found=5}}
−
** [http://www.uniprot.org/uniprot/P20456 P20456]
+
{{#set: total reaction=9}}
−
** [http://www.uniprot.org/uniprot/P0ADG4 P0ADG4]
+
{{#set: completion rate=56.0}}
−
** [http://www.uniprot.org/uniprot/P29218 P29218]
+
−
** [http://www.uniprot.org/uniprot/P54928 P54928]
+
−
** [http://www.uniprot.org/uniprot/P54927 P54927]
+
−
** [http://www.uniprot.org/uniprot/O49071 O49071]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=Inositol monophosphatase}}
+
−
{{#set: ec number=EC-3.1.3.25}}
+
−
{{#set: gene associated=Ec-10_005870|Ec-21_004120|Ec-02_005670|Ec-12_001850|Ec-26_000990|Ec-21_001090|Ec-15_001780|Ec-04_000760|Ec-14_006130}}
+
−
{{#set: in pathway=PWY-2301}}
+
−
{{#set: reconstruction category=orthology|annotation}}
+
−
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 19:28, 21 March 2018

Pathway PWY-7385

  • taxonomic range:
  • common name:
    • 1,3-propanediol biosynthesis (engineered)
  • Synonym(s):
    • 1,3-PDO biosynthesis

Reaction(s) found

5 reactions found over 9 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PWY-7385&oldid=27169"