Difference between revisions of "GCVP-RXN"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5749 PWY-5749] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33154 TAX-3...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GCVP-RXN GCVP-RXN] == * direction: ** REVERSIBLE * common name: ** glycine dehydrogenase (decarboxy...")
 
(One intermediate revision by the same user not shown)
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5749 PWY-5749] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GCVP-RXN GCVP-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33154 TAX-33154]
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** REVERSIBLE
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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* common name:
 
* common name:
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** itaconate degradation
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** glycine dehydrogenase (decarboxylating)
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** Glycine dehydrogenase (decarboxylating)
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* ec number:
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** [http://enzyme.expasy.org/EC/1.4.4.2 EC-1.4.4.2]
 
* Synonym(s):
 
* Synonym(s):
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** 2-methylsuccinate degradation
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''1''' reactions found over '''4''' reactions in the full pathway
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* With identifiers:
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* [[RXN-8988]]
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** 1 [[PROTON]][c] '''+''' 1 [[GLY]][c] '''+''' 1 [[PROTEIN-LIPOYLLYSINE]][c] '''<=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[AMINOMETHYLDIHYDROLIPOYL-GCVH]][c]
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** 1 associated gene(s):
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* With common name(s):
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*** [[Ec-10_000030]]
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** 1 H+[c] '''+''' 1 glycine[c] '''+''' 1 a [glycine-cleavage complex H protein] N6-lipoyl-L-lysine[c] '''<=>''' 1 CO2[c] '''+''' 1 a [glycine-cleavage complex H protein] N6-aminomethyldihydrolipoyl-L-lysine[c]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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== Reaction(s) not found ==
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Genes have been associated with this reaction based on different elements listed below.
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* [http://metacyc.org/META/NEW-IMAGE?object=CITRAMALYL-COA-LYASE-RXN CITRAMALYL-COA-LYASE-RXN]
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* Gene: [[Ec-07_004110]]
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* [http://metacyc.org/META/NEW-IMAGE?object=ITACONYL-COA-HYDRATASE-RXN ITACONYL-COA-HYDRATASE-RXN]
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** Source: [[annotation-esiliculosus_genome]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8987 RXN-8987]
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*** Assignment: GO-TERM
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* Gene: [[Ec-23_004150]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[GLYCINE-SYN2-PWY]], glycine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=GLYCINE-SYN2-PWY GLYCINE-SYN2-PWY]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[GLYCLEAV-PWY]], glycine cleavage: [http://metacyc.org/META/NEW-IMAGE?object=GLYCLEAV-PWY GLYCLEAV-PWY]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-33154}}
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-2}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03425 R03425]
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{{#set: common name=itaconate degradation}}
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* UNIPROT:
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{{#set: common name=2-methylsuccinate degradation}}
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** [http://www.uniprot.org/uniprot/P26969 P26969]
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{{#set: reaction found=1}}
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** [http://www.uniprot.org/uniprot/Q9UXT1 Q9UXT1]
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{{#set: total reaction=4}}
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** [http://www.uniprot.org/uniprot/Q9JT86 Q9JT86]
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{{#set: completion rate=25.0}}
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** [http://www.uniprot.org/uniprot/Q9UXT0 Q9UXT0]
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** [http://www.uniprot.org/uniprot/P23378 P23378]
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** [http://www.uniprot.org/uniprot/P33195 P33195]
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** [http://www.uniprot.org/uniprot/O80988 O80988]
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** [http://www.uniprot.org/uniprot/Q94B78 Q94B78]
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** [http://www.uniprot.org/uniprot/O32915 O32915]
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** [http://www.uniprot.org/uniprot/O22575 O22575]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=glycine dehydrogenase (decarboxylating)}}
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{{#set: common name=Glycine dehydrogenase (decarboxylating)}}
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{{#set: ec number=EC-1.4.4.2}}
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{{#set: gene associated=Ec-07_004110|Ec-23_004150}}
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{{#set: in pathway=GLYCINE-SYN2-PWY|GLYCLEAV-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:28, 21 March 2018

Reaction GCVP-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • glycine dehydrogenase (decarboxylating)
    • Glycine dehydrogenase (decarboxylating)
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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