Difference between revisions of "RXN1F-161"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=P281-PWY P281-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-21...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-161 RXN1F-161] == * direction: ** LEFT-TO-RIGHT * common name: ** GA12-aldehyde monooxygenase...")
 
(One intermediate revision by the same user not shown)
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=P281-PWY P281-PWY] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-161 RXN1F-161] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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* common name:
 
* common name:
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** 3-phenylpropanoate degradation
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** GA12-aldehyde monooxygenase
 
* Synonym(s):
 
* Synonym(s):
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** 3-phenylpropionate degradation
 
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** 3-phenylpropionic acid degradation
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''1''' reactions found over '''9''' reactions in the full pathway
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* With identifiers:
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* [[RXN-2006]]
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** 1 [[CPD1F-138]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[NADPH]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[CPD1F-95]][c]
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** 1 associated gene(s):
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* With common name(s):
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*** [[Ec-26_003940]]
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** 1 gibberellin A12-aldehyde[c] '''+''' 1 oxygen[c] '''+''' 1 NADPH[c] '''=>''' 1 NADP+[c] '''+''' 1 H2O[c] '''+''' 1 gibberellin A12[c]
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** 1 reconstruction source(s) associated:
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*** [[orthology-aragem]]
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== Genes associated with this reaction  ==
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== Reaction(s) not found ==
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Genes have been associated with this reaction based on different elements listed below.
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* [http://metacyc.org/META/NEW-IMAGE?object=1.14.13.58-RXN 1.14.13.58-RXN]
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* Gene: [[Ec-00_005820]]
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* [http://metacyc.org/META/NEW-IMAGE?object=PWY-6223 PWY-6223]
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** Source: [[orthology-aragem]]
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* [http://metacyc.org/META/NEW-IMAGE?object=PWY-6223 PWY-6223]
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* Gene: [[Ec-10_006240]]
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* [http://metacyc.org/META/NEW-IMAGE?object=R241-RXN R241-RXN]
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** Source: [[orthology-aragem]]
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* [http://metacyc.org/META/NEW-IMAGE?object=R242-RXN R242-RXN]
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* Gene: [[Ec-00_005850]]
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* [http://metacyc.org/META/NEW-IMAGE?object=R243-RXN R243-RXN]
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** Source: [[orthology-aragem]]
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* [http://metacyc.org/META/NEW-IMAGE?object=R244-RXN R244-RXN]
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== Pathways  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=R246-RXN R246-RXN]
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* [[PWY-5047]], gibberellin biosynthesis IV (Gibberella fujikuroi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5047 PWY-5047]
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** '''3''' reactions found over '''15''' reactions in the full pathway
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* [[PWY-5034]], GA12 biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5034 PWY-5034]
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** '''3''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-2157}}
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* RHEA:
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{{#set: taxonomic range=TAX-2}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22700 22700]
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{{#set: common name=3-phenylpropanoate degradation}}
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* LIGAND-RXN:
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{{#set: common name=3-phenylpropionate degradation|3-phenylpropionic acid degradation}}
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** [http://www.genome.jp/dbget-bin/www_bget?R06297 R06297]
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{{#set: reaction found=1}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: total reaction=9}}
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{{#set: common name=GA12-aldehyde monooxygenase}}
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{{#set: completion rate=11.0}}
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{{#set: gene associated=Ec-00_005820|Ec-10_006240|Ec-00_005850}}
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{{#set: in pathway=PWY-5047|PWY-5034}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-aragem}}
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{{#set: reconstruction tool=pantograph}}

Latest revision as of 19:28, 21 March 2018

Reaction RXN1F-161

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • GA12-aldehyde monooxygenase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 gibberellin A12-aldehyde[c] + 1 oxygen[c] + 1 NADPH[c] => 1 NADP+[c] + 1 H2O[c] + 1 gibberellin A12[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5047, gibberellin biosynthesis IV (Gibberella fujikuroi): PWY-5047
    • 3 reactions found over 15 reactions in the full pathway
  • PWY-5034, GA12 biosynthesis: PWY-5034
    • 3 reactions found over 6 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN1F-161&oldid=27205"