Difference between revisions of "P163-PWY"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13617 RXN-13617] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=P163-PWY P163-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Pathway]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13617 RXN-13617] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=P163-PWY P163-PWY] ==
−
* direction:
+
* taxonomic range:
−
** LEFT-TO-RIGHT
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
−
* ec number:
+
* common name:
−
** [http://enzyme.expasy.org/EC/2.3.1.16 EC-2.3.1.16]
+
** L-lysine fermentation to acetate and butanoate
 
* Synonym(s):
 
* Synonym(s):
 +
** 3-keto-5-aminohexanoate pathway
 +
** L-lysine fermentation to acetate and butyrate
  
−
== Reaction Formula ==
+
== Reaction(s) found ==
−
* With identifiers:
+
'''1''' reactions found over '''10''' reactions in the full pathway
−
** 1 [[CPD0-2123]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[CPD-196]][c]
+
* [[ACETYL-COA-ACETYLTRANSFER-RXN]]
−
* With common name(s):
+
** 3 associated gene(s):
−
** 1 3-oxodecanoyl-CoA[c] '''+''' 1 coenzyme A[c] '''=>''' 1 acetyl-CoA[c] '''+''' 1 octanoyl-CoA[c]
+
*** [[Ec-26_003940]]
−
 
+
*** [[Ec-24_000870]]
−
== Genes associated with this reaction  ==
+
*** [[Ec-22_002850]]
−
Genes have been associated with this reaction based on different elements listed below.
+
** 2 reconstruction source(s) associated:
−
* [[Ec-26_003940]]
+
*** [[annotation-esiliculosus_genome]]
−
** [[pantograph]]-[[aragem]]
+
*** [[orthology-aragem]]
−
== Pathways  ==
+
== Reaction(s) not found ==
−
* [[PWY-7094]], fatty acid salvage: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7094 PWY-7094]
+
* [http://metacyc.org/META/NEW-IMAGE?object=1.4.1.11-RXN 1.4.1.11-RXN]
−
** '''4''' reactions found over '''6''' reactions in the full pathway
+
* [http://metacyc.org/META/NEW-IMAGE?object=2.8.3.9-RXN 2.8.3.9-RXN]
−
== Reconstruction information  ==
+
* [http://metacyc.org/META/NEW-IMAGE?object=4.3.1.14-RXN 4.3.1.14-RXN]
−
* Category: [[orthology]]
+
* [http://metacyc.org/META/NEW-IMAGE?object=ACETATEKIN-RXN ACETATEKIN-RXN]
−
** Source: [[orthology-aragem]]
+
* [http://metacyc.org/META/NEW-IMAGE?object=BETA-LYSINE-56-AMINOMUTASE-RXN BETA-LYSINE-56-AMINOMUTASE-RXN]
−
*** Tool: [[pantograph]]
+
* [http://metacyc.org/META/NEW-IMAGE?object=BUTYRYL-COA-DEHYDROGENASE-RXN BUTYRYL-COA-DEHYDROGENASE-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=LYSINE-23-AMINOMUTASE-RXN LYSINE-23-AMINOMUTASE-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=PHOSACETYLTRANS-RXN PHOSACETYLTRANS-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=R125-RXN R125-RXN]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: taxonomic range=TAX-2}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31089 31089]
+
{{#set: common name=L-lysine fermentation to acetate and butanoate}}
−
* LIGAND-RXN:
+
{{#set: common name=3-keto-5-aminohexanoate pathway|L-lysine fermentation to acetate and butyrate}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R03778 R03778]
+
{{#set: reaction found=1}}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: total reaction=10}}
−
{{#set: ec number=EC-2.3.1.16}}
+
{{#set: completion rate=10.0}}
−
{{#set: gene associated=Ec-26_003940}}
+
−
{{#set: in pathway=PWY-7094}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction source=orthology-aragem}}
+
−
{{#set: reconstruction tool=pantograph}}
+

Latest revision as of 19:29, 21 March 2018

Pathway P163-PWY

  • taxonomic range:
  • common name:
    • L-lysine fermentation to acetate and butanoate
  • Synonym(s):
    • 3-keto-5-aminohexanoate pathway
    • L-lysine fermentation to acetate and butyrate

Reaction(s) found

1 reactions found over 10 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=P163-PWY&oldid=27219"