Difference between revisions of "RXN-12978"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=OCTAPRENYL-METHYL-METHOXY-BENZQ OCTAPRENYL-METHYL-METHOXY-BENZQ] == * smiles: ** CC(=CCCC(=CCCC...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12978 RXN-12978] == * direction: ** LEFT-TO-RIGHT * common name: ** long chain acyl-CoA synthet...")
 
(One intermediate revision by the same user not shown)
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=OCTAPRENYL-METHYL-METHOXY-BENZQ OCTAPRENYL-METHYL-METHOXY-BENZQ] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12978 RXN-12978] ==
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* smiles:
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* direction:
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** CC(=CCCC(=CCCC(=CCCC(=CCCC(=CCCC(=CCCC(=CCCC(=CCC1(=C(C(OC)=CC(=C1C)O)O))C)C)C)C)C)C)C)C
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=HDSGDGSLNMIMKU-KFSSTAEESA-N
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* common name:
 
* common name:
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** 6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol
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** long chain acyl-CoA synthetase
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* molecular weight:
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** long chain acyl-coA synthetase
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** 699.111   
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* ec number:
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** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
 
* Synonym(s):
 
* Synonym(s):
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** 2-octaprenyl-3-methyl-6-methoxy-1,4-benzenediol
 
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** 6-methoxy-3-methyl-2-octaprenylquinol
 
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** 2-octaprenyl-3-methyl-6-methoxyhydroquinone
 
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** 2-octaprenyl-3-methyl-6-methoxyquinol
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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* [[2-OCTAPRENYL-METHOXY-BENZOQ-METH-RXN]]
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** 1 [[5Z8Z11Z14Z17Z-EICOSAPENTAENOATE]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[CPD-14018]][c] '''+''' 1 [[PPI]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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** 1 icosapentaenoate[c] '''+''' 1 ATP[c] '''+''' 1 coenzyme A[c] '''=>''' 1 AMP[c] '''+''' 1 icosapentaenoyl-CoA[c] '''+''' 1 diphosphate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-01_001560]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-12_008720]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-02_006430]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-03_003710]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=49852330 49852330]
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{{#set: common name=long chain acyl-CoA synthetase}}
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* CHEBI:
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{{#set: common name=long chain acyl-coA synthetase}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=60656 60656]
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{{#set: ec number=EC-6.2.1.3}}
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* BIGG : 1446539
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{{#set: gene associated=Ec-01_001560|Ec-12_008720|Ec-02_006430|Ec-03_003710}}
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{{#set: smiles=CC(=CCCC(=CCCC(=CCCC(=CCCC(=CCCC(=CCCC(=CCCC(=CCC1(=C(C(OC)=CC(=C1C)O)O))C)C)C)C)C)C)C)C}}
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{{#set: in pathway=}}
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{{#set: inchi key=InChIKey=HDSGDGSLNMIMKU-KFSSTAEESA-N}}
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{{#set: reconstruction category=annotation}}
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{{#set: common name=6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: molecular weight=699.111    }}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: common name=2-octaprenyl-3-methyl-6-methoxy-1,4-benzenediol|6-methoxy-3-methyl-2-octaprenylquinol|2-octaprenyl-3-methyl-6-methoxyhydroquinone|2-octaprenyl-3-methyl-6-methoxyquinol}}
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{{#set: produced by=2-OCTAPRENYL-METHOXY-BENZOQ-METH-RXN}}
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Latest revision as of 20:30, 21 March 2018

Reaction RXN-12978

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • long chain acyl-CoA synthetase
    • long chain acyl-coA synthetase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-12978&oldid=27391"