Difference between revisions of "RNA-LIGASE-ATP-RXN"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6154 PWY-6154] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-135623 TAX-...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RNA-LIGASE-ATP-RXN RNA-LIGASE-ATP-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** RNA ligas...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6154 PWY-6154] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RNA-LIGASE-ATP-RXN RNA-LIGASE-ATP-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-135623 TAX-135623]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** autoinducer AI-2 biosynthesis II (Vibrio)
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** RNA ligase/cyclic nucleotide phosphodiesterase
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* ec number:
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** [http://enzyme.expasy.org/EC/6.5.1.3 EC-6.5.1.3]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''1''' reactions found over '''6''' reactions in the full pathway
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* With identifiers:
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* [[ADENOSYLHOMOCYSTEINE-NUCLEOSIDASE-RXN]]
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** 1 [[ATP]][c] '''+''' 1 [[Ribonucleotides]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[Ribonucleotides]][c]
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** 1 associated gene(s):
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* With common name(s):
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*** [[Ec-22_002610]]
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** 1 ATP[c] '''+''' 1 a ribonucleotide[c] '''=>''' 1 AMP[c] '''+''' 1 diphosphate[c] '''+''' 1 a ribonucleotide[c]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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== Reaction(s) not found ==
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Genes have been associated with this reaction based on different elements listed below.
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* [http://metacyc.org/META/NEW-IMAGE?object=RIBOSYLHOMOCYSTEINASE-RXN RIBOSYLHOMOCYSTEINASE-RXN]
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* Gene: [[Ec-01_000990]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-10016 RXN-10016]
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** Source: [[annotation-esiliculosus_genome]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-10018 RXN-10018]
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*** Assignment: AUTOMATED-NAME-MATCH
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-10019 RXN-10019]
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== Pathways  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7605 RXN-7605]
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-135623}}
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* LIGAND-RXN:
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{{#set: common name=autoinducer AI-2 biosynthesis II (Vibrio)}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07640 R07640]
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{{#set: reaction found=1}}
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* UNIPROT:
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{{#set: total reaction=6}}
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** [http://www.uniprot.org/uniprot/P00971 P00971]
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{{#set: completion rate=17.0}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=RNA ligase/cyclic nucleotide phosphodiesterase}}
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{{#set: ec number=EC-6.5.1.3}}
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{{#set: gene associated=Ec-01_000990}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:31, 21 March 2018

Reaction RNA-LIGASE-ATP-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • RNA ligase/cyclic nucleotide phosphodiesterase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 a ribonucleotide[c] => 1 AMP[c] + 1 diphosphate[c] + 1 a ribonucleotide[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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