Difference between revisions of "RXN-10039"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-4302 PWY-4302] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33682 TAX-3...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10039 RXN-10039] == * direction: ** LEFT-TO-RIGHT * common name: ** O-phosphoseryl-tRNA(Sec) se...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-4302 PWY-4302] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10039 RXN-10039] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33682 TAX-33682]
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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* common name:
 
* common name:
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** aerobic respiration III (alternative oxidase pathway)
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** O-phosphoseryl-tRNA(Sec) selenium transferase
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* ec number:
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** [http://enzyme.expasy.org/EC/2.9.1.2 EC-2.9.1.2]
 
* Synonym(s):
 
* Synonym(s):
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** alternative oxidase pathway
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''3''' reactions found over '''3''' reactions in the full pathway
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* With identifiers:
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* [[NADH-DEHYDROG-A-RXN]]
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** 1 [[SEPO3]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[O-phospho-L-seryl-tRNASecs]][c] '''=>''' 2 [[Pi]][c] '''+''' 1 [[Charged-SEC-tRNAs]][c]
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** 15 associated gene(s):
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* With common name(s):
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*** [[Ec-08_005450]]
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** 1 selenophosphate[c] '''+''' 1 H2O[c] '''+''' 1 an O-phospho-L-seryl-[tRNASec][c] '''=>''' 2 phosphate[c] '''+''' 1 an L-selenocysteinyl-[tRNAsec][c]
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*** [[Ec-01_008630]]
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*** [[Ec-20_001030]]
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== Genes associated with this reaction  ==
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*** [[Ec-10_005810]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[Ec-21_001150]]
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* Gene: [[Ec-14_006440]]
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*** [[Ec-21_004880]]
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** Source: [[annotation-esiliculosus_genome]]
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*** [[Ec-05_005740]]
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*** Assignment: AUTOMATED-NAME-MATCH
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*** [[Ec-02_006350]]
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== Pathways  ==
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*** [[Ec-18_003900]]
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* [[PWY-6281]], L-selenocysteine biosynthesis II (archaea and eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6281 PWY-6281]
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*** [[Ec-03_000900]]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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*** [[Ec-10_001380]]
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== Reconstruction information  ==
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*** [[Ec-01_000420]]
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* Category: [[annotation]]
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*** [[Ec-19_001720]]
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** Source: [[annotation-esiliculosus_genome]]
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*** [[Ec-21_003400]]
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*** Tool: [[pathwaytools]]
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*** [[Ec-06_007580]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[RXN-6883]]
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** 3 associated gene(s):
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*** [[Ec-05_004910]]
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*** [[Ec-11_004730]]
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*** [[Ec-01_002050]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN]]
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** 6 associated gene(s):
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*** [[Ec-07_002870]]
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*** [[Ec-07_007310]]
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*** [[Ec-11_000360]]
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*** [[Ec-21_003470]]
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*** [[Ec-05_003640]]
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*** [[Ec-27_006560]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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== Reaction(s) not found ==
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== External links  ==
 
== External links  ==
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* ARACYC:
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* LIGAND-RXN:
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** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-4302 PWY-4302]
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** [http://www.genome.jp/dbget-bin/www_bget?R08224 R08224]
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{{#set: taxonomic range=TAX-33682}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-4751}}
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{{#set: common name=O-phosphoseryl-tRNA(Sec) selenium transferase}}
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{{#set: taxonomic range=TAX-33090}}
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{{#set: ec number=EC-2.9.1.2}}
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{{#set: common name=aerobic respiration III (alternative oxidase pathway)}}
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{{#set: gene associated=Ec-14_006440}}
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{{#set: common name=alternative oxidase pathway}}
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{{#set: in pathway=PWY-6281}}
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{{#set: reaction found=3}}
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{{#set: reconstruction category=annotation}}
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{{#set: total reaction=3}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: completion rate=100.0}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:31, 21 March 2018

Reaction RXN-10039

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • O-phosphoseryl-tRNA(Sec) selenium transferase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6281, L-selenocysteine biosynthesis II (archaea and eukaryotes): PWY-6281
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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