Difference between revisions of "DCMP-DEAMINASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-3523 RXN-3523] == * direction: ** LEFT-TO-RIGHT * common name: ** L-ascorbate peroxidase * Syno...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DCMP-DEAMINASE-RXN DCMP-DEAMINASE-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enz...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-3523 RXN-3523] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DCMP-DEAMINASE-RXN DCMP-DEAMINASE-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
+
* ec number:
−
** L-ascorbate peroxidase
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** [http://enzyme.expasy.org/EC/3.5.4.12 EC-3.5.4.12]
 
* Synonym(s):
 
* Synonym(s):
−
** L-ascorbic acid peroxidase
 
−
** L-ascorbic acid-specific peroxidase
 
−
** ascorbate peroxidase
 
−
** ascorbic acid peroxidase
 
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 2 [[CPD-318]][c] '''=>''' 1 [[L-DEHYDRO-ASCORBATE]][c] '''+''' 1 [[ASCORBATE]][c] '''+''' 1 [[PROTON]][c]
+
** 1 [[DCMP]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[DUMP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 2 monodehydroascorbate radical[c] '''=>''' 1 L-dehydro-ascorbate[c] '''+''' 1 L-ascorbate[c] '''+''' 1 H+[c]
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** 1 dCMP[c] '''+''' 1 H2O[c] '''+''' 1 H+[c] '''=>''' 1 ammonium[c] '''+''' 1 dUMP[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Ec-12_003010]]
 +
** Source: [[orthology-aragem]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6370]], ascorbate recycling (cytosolic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6370 PWY-6370]
+
* [[PWY-7210]], pyrimidine deoxyribonucleotides biosynthesis from CTP: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7210 PWY-7210]
−
** '''4''' reactions found over '''6''' reactions in the full pathway
+
** '''8''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-2261]], ascorbate glutathione cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2261 PWY-2261]
+
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[annotation]]
+
* Category: [[orthology]]
−
** Source: [[annotation-esiliculosus_genome]]
+
** Source: [[orthology-aragem]]
−
*** Tool: [[pathwaytools]]
+
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30270 30270]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22924 22924]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R03186 R03186]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01663 R01663]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P32321 P32321]
 +
** [http://www.uniprot.org/uniprot/P00814 P00814]
 +
** [http://www.uniprot.org/uniprot/P16006 P16006]
 +
** [http://www.uniprot.org/uniprot/P06773 P06773]
 +
** [http://www.uniprot.org/uniprot/O74069 O74069]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=L-ascorbate peroxidase}}
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{{#set: ec number=EC-3.5.4.12}}
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{{#set: common name=L-ascorbic acid peroxidase|L-ascorbic acid-specific peroxidase|ascorbate peroxidase|ascorbic acid peroxidase}}
+
{{#set: gene associated=Ec-12_003010}}
−
{{#set: in pathway=PWY-6370|PWY-2261}}
+
{{#set: in pathway=PWY-7210}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction source=annotation-esiliculosus_genome}}
+
{{#set: reconstruction source=orthology-aragem}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph}}

Latest revision as of 19:32, 21 March 2018

Reaction DCMP-DEAMINASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 dCMP[c] + 1 H2O[c] + 1 H+[c] => 1 ammonium[c] + 1 dUMP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7210, pyrimidine deoxyribonucleotides biosynthesis from CTP: PWY-7210
    • 8 reactions found over 8 reactions in the full pathway

Reconstruction information

External links




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