Difference between revisions of "6.2.1.34-RXN"

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(Created page with "Category:Gene == Gene Ec-19_002750 == * left end position: ** 3042016 * transcription direction: ** NEGATIVE * right end position: ** 3047279 * centisome position: ** 50.9...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=6.2.1.34-RXN 6.2.1.34-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.o...")
 
(One intermediate revision by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Ec-19_002750 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=6.2.1.34-RXN 6.2.1.34-RXN] ==
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* left end position:
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* direction:
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** 3042016
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** LEFT-TO-RIGHT
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* transcription direction:
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* ec number:
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** NEGATIVE
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** [http://enzyme.expasy.org/EC/6.2.1.34 EC-6.2.1.34]
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* right end position:
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** 3047279
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* centisome position:
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** 50.94917   
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* Synonym(s):
 
* Synonym(s):
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** Esi_0035_0121
 
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** Esi0035_0121
 
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[NARINGENIN-3-DIOXYGENASE-RXN]]
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* With identifiers:
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** [[pantograph]]-[[aragem]]
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** 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[FERULIC-ACID]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[FERULOYL-COA]][c]
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* [[RXN-113]]
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* With common name(s):
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** [[pantograph]]-[[aragem]]
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** 1 ATP[c] '''+''' 1 coenzyme A[c] '''+''' 1 ferulate[c] '''=>''' 1 diphosphate[c] '''+''' 1 AMP[c] '''+''' 1 feruloyl-CoA[c]
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* [[RXN-115]]
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** esiliculosus_genome
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== Genes associated with this reaction  ==
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***ec-number
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Genes have been associated with this reaction based on different elements listed below.
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** [[pantograph]]-[[aragem]]
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* Gene: [[Ec-10_001480]]
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* [[RXN-171]]
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** Source: [[orthology-aragem]]
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** [[pantograph]]-[[aragem]]
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* Gene: [[Ec-04_001280]]
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* [[RXN-527]]
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** Source: [[orthology-aragem]]
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** [[pantograph]]-[[aragem]]
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== Pathways  ==
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* [[RXN-602]]
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* [[PWY-6343]], ferulate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6343 PWY-6343]
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** [[pantograph]]-[[aragem]]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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* [[RXN-6550]]
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* [[PWY-1121]], suberin monomers biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-1121 PWY-1121]
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** [[pantograph]]-[[aragem]]
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** '''6''' reactions found over '''19''' reactions in the full pathway
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* [[RXN-7648]]
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== Reconstruction information  ==
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** [[pantograph]]-[[aragem]]
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* Category: [[orthology]]
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* [[RXN-7775]]
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** Source: [[orthology-aragem]]
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** [[pantograph]]-[[aragem]]
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*** Tool: [[pantograph]]
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* [[RXN-7922]]
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−
** [[pantograph]]-[[aragem]]
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−
* [[RXN-8450]]
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−
** [[pantograph]]-[[aragem]]
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−
* [[RXN1F-162]]
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−
** [[pantograph]]-[[aragem]]
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−
* [[RXN1F-163]]
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−
** [[pantograph]]-[[aragem]]
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−
* [[RXN1F-165]]
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−
** [[pantograph]]-[[aragem]]
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−
* [[RXN1F-167]]
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−
** [[pantograph]]-[[aragem]]
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−
* [[RXN1F-168]]
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−
** [[pantograph]]-[[aragem]]
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−
* [[RXN1F-93]]
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−
** [[pantograph]]-[[aragem]]
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−
== Pathways associated ==
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−
* [[PWY-5059]]
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* [[PWY1F-FLAVSYN]]
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−
* [[PWY-6787]]
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* [[PWY-5035]]
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−
* [[PWY-5390]]
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−
* [[PWY-5391]]
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−
* [[PWY-5070]]
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−
* [[PWY-5152]]
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−
* [[PWY-3101]]
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−
* [[PWY1F-823]]
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−
* [[PWY-102]]
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== External links  ==
 
== External links  ==
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{{#set: left end position=3042016}}
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* LIGAND-RXN:
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02194 R02194]
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{{#set: right end position=3047279}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: centisome position=50.94917    }}
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{{#set: ec number=EC-6.2.1.34}}
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{{#set: common name=Esi_0035_0121|Esi0035_0121}}
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{{#set: gene associated=Ec-10_001480|Ec-04_001280}}
−
{{#set: reaction associated=NARINGENIN-3-DIOXYGENASE-RXN|RXN-113|RXN-115|RXN-171|RXN-527|RXN-602|RXN-6550|RXN-7648|RXN-7775|RXN-7922|RXN-8450|RXN1F-162|RXN1F-163|RXN1F-165|RXN1F-167|RXN1F-168|RXN1F-93}}
+
{{#set: in pathway=PWY-6343|PWY-1121}}
−
{{#set: pathway associated=PWY-5059|PWY1F-FLAVSYN|PWY-6787|PWY-5035|PWY-5390|PWY-5391|PWY-5070|PWY-5152|PWY-3101|PWY1F-823|PWY-102}}
+
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-aragem}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 19:32, 21 March 2018

Reaction 6.2.1.34-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 coenzyme A[c] + 1 ferulate[c] => 1 diphosphate[c] + 1 AMP[c] + 1 feruloyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6343, ferulate degradation: PWY-6343
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-1121, suberin monomers biosynthesis: PWY-1121
    • 6 reactions found over 19 reactions in the full pathway

Reconstruction information

External links




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