Difference between revisions of "RXN0-2142"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HOMOCYSMET-RXN HOMOCYSMET-RXN] == * direction: ** REVERSIBLE * common name: ** 5-methyltetrahydropt...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-2142 RXN0-2142] == * direction: ** LEFT-TO-RIGHT * common name: ** NAD(P)-binding domain * ec...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HOMOCYSMET-RXN HOMOCYSMET-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-2142 RXN0-2142] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase
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** NAD(P)-binding domain
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** Methionine synthase
+
 
* ec number:
 
* ec number:
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** [http://enzyme.expasy.org/EC/2.1.1.14 EC-2.1.1.14]
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** [http://enzyme.expasy.org/EC/1.1.1.100 EC-1.1.1.100]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD-1302]][c] '''+''' 1 [[HOMO-CYS]][c] '''<=>''' 1 [[MET]][c] '''+''' 1 [[CPD-1301]][c]
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** 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[b-Keto-cis-D5-dodecenoyl-ACPs]][c] '''=>''' 1 [[b-Hydroxy-cis-D5-dodecenoyl-ACPs]][c] '''+''' 1 [[NADP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 N5-methyl--tetrahydropteroyl tri-L-glutamate[c] '''+''' 1 L-homocysteine[c] '''<=>''' 1 L-methionine[c] '''+''' 1 tetrahydropteroyl tri-L-glutamate[c]
+
** 1 NADPH[c] '''+''' 1 H+[c] '''+''' 1 a (5Z)-3-oxo-dodec-5-enoyl-[acp][c] '''=>''' 1 a (3R,5Z)-3-hydroxy-dodec-5-enoyl-[acp][c] '''+''' 1 NADP+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-28_003190]]
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* Gene: [[Ec-01_007100]]
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** ESILICULOSUS_GENOME
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** Source: [[annotation-esiliculosus_genome]]
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***EC-NUMBER
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*** Assignment: EC-NUMBER
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** [[pantograph]]-[[aragem]]
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−
* [[Ec-06_000970]]
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−
** ESILICULOSUS_GENOME
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−
***AUTOMATED-NAME-MATCH
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== Pathways  ==
 
== Pathways  ==
−
* [[HOMOSER-METSYN-PWY]], L-methionine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=HOMOSER-METSYN-PWY HOMOSER-METSYN-PWY]
+
* [[PWY0-862]], (5Z)-dodec-5-enoate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-862 PWY0-862]
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** '''5''' reactions found over '''5''' reactions in the full pathway
+
−
* [[PWY-702]], L-methionine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-702 PWY-702]
+
 
** '''6''' reactions found over '''6''' reactions in the full pathway
 
** '''6''' reactions found over '''6''' reactions in the full pathway
−
* [[HSERMETANA-PWY]], L-methionine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=HSERMETANA-PWY HSERMETANA-PWY]
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-6151]], S-adenosyl-L-methionine cycle I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6151 PWY-6151]
 
−
** '''3''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-5041]], S-adenosyl-L-methionine cycle II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5041 PWY-5041]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
 
−
** Source: [[orthology-aragem]]
 
−
*** Tool: [[pantograph]]
 
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=LEFT-TO-RIGHT}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21196 21196]
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{{#set: common name=NAD(P)-binding domain}}
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* LIGAND-RXN:
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{{#set: ec number=EC-1.1.1.100}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04405 R04405]
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{{#set: gene associated=Ec-01_007100}}
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* UNIPROT:
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{{#set: in pathway=PWY0-862}}
−
** [http://www.uniprot.org/uniprot/P25665 P25665]
+
{{#set: reconstruction category=annotation}}
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** [http://www.uniprot.org/uniprot/P45331 P45331]
+
{{#set: reconstruction source=annotation-esiliculosus_genome}}
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** [http://www.uniprot.org/uniprot/Q9PN94 Q9PN94]
+
{{#set: reconstruction tool=pathwaytools}}
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** [http://www.uniprot.org/uniprot/O26869 O26869]
+
−
** [http://www.uniprot.org/uniprot/Q9JUT6 Q9JUT6]
+
−
** [http://www.uniprot.org/uniprot/Q9CG55 Q9CG55]
+
−
** [http://www.uniprot.org/uniprot/P05694 P05694]
+
−
** [http://www.uniprot.org/uniprot/Q42699 Q42699]
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−
** [http://www.uniprot.org/uniprot/Q39586 Q39586]
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−
** [http://www.uniprot.org/uniprot/O48613 O48613]
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−
** [http://www.uniprot.org/uniprot/P93263 P93263]
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−
** [http://www.uniprot.org/uniprot/Q9UT19 Q9UT19]
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−
{{#set: direction=REVERSIBLE}}
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−
{{#set: common name=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase}}
+
−
{{#set: common name=Methionine synthase}}
+
−
{{#set: ec number=EC-2.1.1.14}}
+
−
{{#set: gene associated=Ec-28_003190|Ec-06_000970}}
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−
{{#set: in pathway=HOMOSER-METSYN-PWY|PWY-702|HSERMETANA-PWY|PWY-6151|PWY-5041}}
+
−
{{#set: reconstruction category=orthology|annotation}}
+
−
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 20:32, 21 March 2018

Reaction RXN0-2142

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • NAD(P)-binding domain
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY0-862, (5Z)-dodec-5-enoate biosynthesis: PWY0-862
    • 6 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN0-2142&oldid=27592"