Difference between revisions of "RXN0-5234"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5268 PWY-5268] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3398 TAX-33...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5234 RXN0-5234] == * direction: ** LEFT-TO-RIGHT * common name: ** Serine hydroxymethyltransfe...")
 
(One intermediate revision by the same user not shown)
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[[Category:Pathway]]
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[[Category:Reaction]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5268 PWY-5268] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5234 RXN0-5234] ==
* taxonomic range:
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* direction:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3398 TAX-3398]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** salvianin biosynthesis
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** Serine hydroxymethyltransferase
 +
* ec number:
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** [http://enzyme.expasy.org/EC/4.1.2 EC-4.1.2]
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction(s) found ==
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== Reaction Formula ==
'''1''' reactions found over '''6''' reactions in the full pathway
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* With identifiers:
* [[RXN-7828]]
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** 1 [[ALLO-THR]][c] '''=>''' 1 [[GLY]][c] '''+''' 1 [[ACETALD]][c]
** 3 associated gene(s):
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* With common name(s):
*** [[Ec-28_003310]]
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** 1 DL-allothreonine[c] '''=>''' 1 glycine[c] '''+''' 1 acetaldehyde[c]
*** [[Ec-14_000870]]
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*** [[Ec-04_004610]]
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== Genes associated with this reaction  ==
** 1 reconstruction source(s) associated:
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Genes have been associated with this reaction based on different elements listed below.
*** [[orthology-aragem]]
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* Gene: [[Ec-14_004260]]
== Reaction(s) not found ==
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** Source: [[annotation-esiliculosus_genome]]
* [http://metacyc.org/META/NEW-IMAGE?object=2.3.1.172-RXN 2.3.1.172-RXN]
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*** Assignment: AUTOMATED-NAME-MATCH
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7997 RXN-7997]
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* Gene: [[Ec-24_002640]]
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8138 RXN-8138]
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** Source: [[annotation-esiliculosus_genome]]
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8139 RXN-8139]
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*** Assignment: AUTOMATED-NAME-MATCH
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8140 RXN-8140]
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== Pathways  ==
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
{{#set: taxonomic range=TAX-3398}}
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{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=salvianin biosynthesis}}
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{{#set: common name=Serine hydroxymethyltransferase}}
{{#set: reaction found=1}}
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{{#set: ec number=EC-4.1.2}}
{{#set: total reaction=6}}
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{{#set: gene associated=Ec-14_004260|Ec-24_002640}}
{{#set: completion rate=17.0}}
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{{#set: in pathway=}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:32, 21 March 2018

Reaction RXN0-5234

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Serine hydroxymethyltransferase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 DL-allothreonine[c] => 1 glycine[c] + 1 acetaldehyde[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links