Difference between revisions of "PWY-3221"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=FPPSYN-RXN FPPSYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Prenyltransferase/squalen...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-3221 PWY-3221] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3398 TAX-33...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=FPPSYN-RXN FPPSYN-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-3221 PWY-3221] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3398 TAX-3398]
 
* common name:
 
* common name:
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** Prenyltransferase/squalene oxidase
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** dTDP-L-rhamnose biosynthesis II
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** Farnesyl pyrophosphate synthase
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* ec number:
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** [http://enzyme.expasy.org/EC/2.5.1.10 EC-2.5.1.10]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''1''' reactions found over '''3''' reactions in the full pathway
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** 1 [[DELTA3-ISOPENTENYL-PP]][c] '''+''' 1 [[GERANYL-PP]][c] '''=>''' 1 [[FARNESYL-PP]][c] '''+''' 1 [[PPI]][c]
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* [[DTDPGLUCDEHYDRAT-RXN]]
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* With common name(s):
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** 2 associated gene(s):
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** 1 isopentenyl diphosphate[c] '''+''' 1 geranyl diphosphate[c] '''=>''' 1 (2E,6E)-farnesyl diphosphate[c] '''+''' 1 diphosphate[c]
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*** [[Ec-27_005770]]
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*** [[Ec-01_007350]]
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== Genes associated with this reaction  ==
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** 2 reconstruction source(s) associated:
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Genes have been associated with this reaction based on different elements listed below.
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*** [[annotation-esiliculosus_genome]]
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* [[Ec-07_006170]]
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*** [[orthology-aragem]]
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** ESILICULOSUS_GENOME
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== Reaction(s) not found ==
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***AUTOMATED-NAME-MATCH
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* [http://metacyc.org/META/NEW-IMAGE?object=DTDPGLUCOSEPP-RXN DTDPGLUCOSEPP-RXN]
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* [[Ec-10_003020]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-5461 RXN-5461]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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* [[Ec-16_004330]]
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** [[pantograph]]-[[aragem]]
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== Pathways  ==
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* [[PWY-7721]], methyl phomopsenoate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7721 PWY-7721]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-7736]], stellatic acid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7736 PWY-7736]
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** '''3''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-5123]], trans, trans-farnesyl diphosphate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5123 PWY-5123]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-7102]], bisabolene biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7102 PWY-7102]
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** '''3''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-6859]], all-trans-farnesol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6859 PWY-6859]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* ARACYC:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19361 19361]
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** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-3221 PWY-3221]
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-3398}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02003 R02003]
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{{#set: common name=dTDP-L-rhamnose biosynthesis II}}
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* UNIPROT:
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{{#set: reaction found=1}}
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** [http://www.uniprot.org/uniprot/P08524 P08524]
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{{#set: total reaction=3}}
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** [http://www.uniprot.org/uniprot/P05369 P05369]
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{{#set: completion rate=33.0}}
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** [http://www.uniprot.org/uniprot/P14324 P14324]
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** [http://www.uniprot.org/uniprot/Q9CH81 Q9CH81]
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** [http://www.uniprot.org/uniprot/Q9PM32 Q9PM32]
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** [http://www.uniprot.org/uniprot/P45204 P45204]
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** [http://www.uniprot.org/uniprot/Q9JSM0 Q9JSM0]
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** [http://www.uniprot.org/uniprot/P49350 P49350]
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** [http://www.uniprot.org/uniprot/P22939 P22939]
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** [http://www.uniprot.org/uniprot/Q08291 Q08291]
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** [http://www.uniprot.org/uniprot/P49349 P49349]
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** [http://www.uniprot.org/uniprot/Q09152 Q09152]
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** [http://www.uniprot.org/uniprot/P49351 P49351]
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** [http://www.uniprot.org/uniprot/P49352 P49352]
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** [http://www.uniprot.org/uniprot/Q43315 Q43315]
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** [http://www.uniprot.org/uniprot/O24241 O24241]
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** [http://www.uniprot.org/uniprot/O24242 O24242]
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** [http://www.uniprot.org/uniprot/Q92334 Q92334]
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** [http://www.uniprot.org/uniprot/Q92218 Q92218]
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** [http://www.uniprot.org/uniprot/Q92235 Q92235]
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** [http://www.uniprot.org/uniprot/Q92250 Q92250]
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** [http://www.uniprot.org/uniprot/Q8L7F4 Q8L7F4]
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** [http://www.uniprot.org/uniprot/P49353 P49353]
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** [http://www.uniprot.org/uniprot/O04882 O04882]
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** [http://www.uniprot.org/uniprot/O65004 O65004]
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** [http://www.uniprot.org/uniprot/O14230 O14230]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Prenyltransferase/squalene oxidase}}
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{{#set: common name=Farnesyl pyrophosphate synthase}}
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{{#set: ec number=EC-2.5.1.10}}
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{{#set: gene associated=Ec-07_006170|Ec-10_003020|Ec-16_004330}}
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{{#set: in pathway=PWY-7721|PWY-7736|PWY-5123|PWY-7102|PWY-6859}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 19:33, 21 March 2018

Pathway PWY-3221

  • taxonomic range:
  • common name:
    • dTDP-L-rhamnose biosynthesis II
  • Synonym(s):

Reaction(s) found

1 reactions found over 3 reactions in the full pathway

Reaction(s) not found

External links



Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PWY-3221&oldid=27687"