Difference between revisions of "RXN0-5395"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7664 PWY-7664] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5395 RXN0-5395] == * direction: ** LEFT-TO-RIGHT * common name: ** Glycoside hydrolase, cataly...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Pathway]]
+
[[Category:Reaction]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7664 PWY-7664] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5395 RXN0-5395] ==
−
* taxonomic range:
+
* direction:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** oleate biosynthesis IV (anaerobic)
+
** Glycoside hydrolase, catalytic domain
 +
** Glycoside hydrolase/deacetylase, beta/alpha-barrel
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/3.2.1 EC-3.2.1]
 
* Synonym(s):
 
* Synonym(s):
−
** cis-7-hexadecenoate biosynthesis
 
−
** cis-9-octadecenoate biosynthesis
 
−
** (7Z)-hexadec-7-enoate biosynthesis
 
−
** (9Z)-octadec-9-enoate biosynthesis
 
−
** (7Z)-hexadecenoate biosynthesis
 
−
** (9Z)-octadecenoate biosynthesis
 
  
−
== Reaction(s) found ==
+
== Reaction Formula ==
−
'''10''' reactions found over '''14''' reactions in the full pathway
+
* With identifiers:
−
* [[RXN-16615]]
+
** 1 [[WATER]][c] '''+''' 1 [[3-BETA-D-GLUCOSYLGLUCOSE]][c] '''=>''' 2 [[Glucopyranose]][c]
−
** 4 associated gene(s):
+
* With common name(s):
−
*** [[Ec-27_002090]]
+
** 1 H2O[c] '''+''' 1 nigerose[c] '''=>''' 2 D-glucopyranose[c]
−
*** [[Ec-12_000650]]
+
 
−
*** [[Ec-27_003480]]
+
== Genes associated with this reaction  ==
−
*** [[Ec-12_000640]]
+
Genes have been associated with this reaction based on different elements listed below.
−
** 1 reconstruction source(s) associated:
+
* Gene: [[Ec-19_000430]]
−
*** [[annotation-esiliculosus_genome]]
+
** Source: [[annotation-esiliculosus_genome]]
−
* [[RXN-16616]]
+
*** Assignment: AUTOMATED-NAME-MATCH
−
** 1 associated gene(s):
+
* Gene: [[Ec-08_004650]]
−
*** [[Ec-01_007100]]
+
** Source: [[annotation-esiliculosus_genome]]
−
** 1 reconstruction source(s) associated:
+
*** Assignment: AUTOMATED-NAME-MATCH
−
*** [[annotation-esiliculosus_genome]]
+
* Gene: [[Ec-23_003530]]
−
* [[RXN-16620]]
+
** Source: [[annotation-esiliculosus_genome]]
−
** 1 associated gene(s):
+
*** Assignment: AUTOMATED-NAME-MATCH
−
*** [[Ec-27_002470]]
+
== Pathways  ==
−
** 1 reconstruction source(s) associated:
+
== Reconstruction information  ==
−
*** [[annotation-esiliculosus_genome]]
+
* Category: [[annotation]]
−
* [[RXN-16621]]
+
** Source: [[annotation-esiliculosus_genome]]
−
** 4 associated gene(s):
+
*** Tool: [[pathwaytools]]
−
*** [[Ec-27_003480]]
+
−
*** [[Ec-12_000650]]
+
−
*** [[Ec-12_000640]]
+
−
*** [[Ec-27_002090]]
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[annotation-esiliculosus_genome]]
+
−
* [[RXN-16622]]
+
−
** 1 associated gene(s):
+
−
*** [[Ec-01_007100]]
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[annotation-esiliculosus_genome]]
+
−
* [[RXN-16624]]
+
−
** 1 associated gene(s):
+
−
*** [[Ec-27_002470]]
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[annotation-esiliculosus_genome]]
+
−
* [[RXN-16625]]
+
−
** 4 associated gene(s):
+
−
*** [[Ec-12_000650]]
+
−
*** [[Ec-27_003480]]
+
−
*** [[Ec-27_002090]]
+
−
*** [[Ec-12_000640]]
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[annotation-esiliculosus_genome]]
+
−
* [[RXN-16626]]
+
−
** 1 associated gene(s):
+
−
*** [[Ec-01_007100]]
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[annotation-esiliculosus_genome]]
+
−
* [[RXN-16628]]
+
−
** 1 associated gene(s):
+
−
*** [[Ec-27_002470]]
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[annotation-esiliculosus_genome]]
+
−
* [[RXN-9533]]
+
−
** 0 associated gene:
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
+
−
== Reaction(s) not found ==
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16614 RXN-16614]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16619 RXN-16619]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16623 RXN-16623]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16627 RXN-16627]
+
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-2}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=oleate biosynthesis IV (anaerobic)}}
+
{{#set: common name=Glycoside hydrolase, catalytic domain}}
−
{{#set: common name=cis-7-hexadecenoate biosynthesis|cis-9-octadecenoate biosynthesis|(7Z)-hexadec-7-enoate biosynthesis|(9Z)-octadec-9-enoate biosynthesis|(7Z)-hexadecenoate biosynthesis|(9Z)-octadecenoate biosynthesis}}
+
{{#set: common name=Glycoside hydrolase/deacetylase, beta/alpha-barrel}}
−
{{#set: reaction found=10}}
+
{{#set: ec number=EC-3.2.1}}
−
{{#set: total reaction=14}}
+
{{#set: gene associated=Ec-19_000430|Ec-08_004650|Ec-23_003530}}
−
{{#set: completion rate=71.0}}
+
{{#set: in pathway=}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:33, 21 March 2018

Reaction RXN0-5395

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Glycoside hydrolase, catalytic domain
    • Glycoside hydrolase/deacetylase, beta/alpha-barrel
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN0-5395&oldid=27706"