Difference between revisions of "RXN-17797"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY66-398 PWY66-398] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17797 RXN-17797] == * direction: ** LEFT-TO-RIGHT * common name: ** 6-phosphogluconate dehydrog...")
 
(One intermediate revision by the same user not shown)
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY66-398 PWY66-398] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17797 RXN-17797] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-33208]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** TCA cycle III (animals)
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** 6-phosphogluconate dehydrogenase, C-terminal-like
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** 3-hydroxyacyl-CoA dehydrogenase
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* ec number:
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** [http://enzyme.expasy.org/EC/1.1.1.35 EC-1.1.1.35]
 
* Synonym(s):
 
* Synonym(s):
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** tricarboxylic acid cycle
 
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** citric acid cycle
 
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** Szent-Gyorgyi-Krebs cycle
 
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** Krebs cycle
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''10''' reactions found over '''11''' reactions in the full pathway
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* With identifiers:
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* [[2OXOGLUTDECARB-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[CPD-19150]][c] '''=>''' 1 [[CPD-19151]][c]
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** 4 associated gene(s):
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* With common name(s):
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*** [[Ec-25_000020]]
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** 1 H2O[c] '''+''' 1 (2E,5Z)-dodecenoyl-CoA[c] '''=>''' 1 (S)-3-hydroxy-(5Z)-dodecenoyl-CoA[c]
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*** [[Ec-27_004160]]
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*** [[Ec-21_002310]]
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== Genes associated with this reaction  ==
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*** [[Ec-21_002300]]
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Genes have been associated with this reaction based on different elements listed below.
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** 1 reconstruction source(s) associated:
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* Gene: [[Ec-14_006530]]
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*** [[annotation-esiliculosus_genome]]
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** Source: [[annotation-esiliculosus_genome]]
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* [[ACONITATEDEHYDR-RXN]]
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*** Assignment: GO-TERM
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** 2 associated gene(s):
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* Gene: [[Ec-19_005290]]
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*** [[Ec-16_001000]]
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** Source: [[annotation-esiliculosus_genome]]
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*** [[Ec-12_000170]]
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*** Assignment: EC-NUMBER
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** 1 reconstruction source(s) associated:
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== Pathways  ==
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*** [[annotation-esiliculosus_genome]]
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== Reconstruction information  ==
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* [[ACONITATEHYDR-RXN]]
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* Category: [[annotation]]
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** 2 associated gene(s):
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** Source: [[annotation-esiliculosus_genome]]
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*** [[Ec-12_000170]]
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*** Tool: [[pathwaytools]]
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*** [[Ec-16_001000]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[CITSYN-RXN]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[FUMHYDR-RXN]]
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** 2 associated gene(s):
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*** [[Ec-23_003460]]
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*** [[Ec-25_001360]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[MALATE-DEH-RXN]]
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** 2 associated gene(s):
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*** [[Ec-10_006200]]
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*** [[Ec-02_003100]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[RXN0-1147]]
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** 3 associated gene(s):
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*** [[Ec-21_002300]]
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*** [[Ec-25_000020]]
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*** [[Ec-27_004160]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[SUCCCOASYN-RXN]]
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** 2 associated gene(s):
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*** [[Ec-10_000030]]
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*** [[Ec-02_001020]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[SUCCINATE--COA-LIGASE-GDP-FORMING-RXN]]
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** 1 associated gene(s):
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*** [[Ec-10_000030]]
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** 1 reconstruction source(s) associated:
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−
*** [[annotation-esiliculosus_genome]]
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* [[SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN]]
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** 6 associated gene(s):
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*** [[Ec-07_002870]]
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*** [[Ec-07_007310]]
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*** [[Ec-11_000360]]
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*** [[Ec-21_003470]]
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*** [[Ec-05_003640]]
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*** [[Ec-27_006560]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=ISOCITRATE-DEHYDROGENASE-NAD+-RXN ISOCITRATE-DEHYDROGENASE-NAD+-RXN]
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== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-33208}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=TCA cycle III (animals)}}
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{{#set: common name=6-phosphogluconate dehydrogenase, C-terminal-like}}
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{{#set: common name=tricarboxylic acid cycle|citric acid cycle|Szent-Gyorgyi-Krebs cycle|Krebs cycle}}
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{{#set: common name=3-hydroxyacyl-CoA dehydrogenase}}
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{{#set: reaction found=10}}
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{{#set: ec number=EC-1.1.1.35}}
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{{#set: total reaction=11}}
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{{#set: gene associated=Ec-14_006530|Ec-19_005290}}
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{{#set: completion rate=91.0}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:33, 21 March 2018

Reaction RXN-17797

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 6-phosphogluconate dehydrogenase, C-terminal-like
    • 3-hydroxyacyl-CoA dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 (2E,5Z)-dodecenoyl-CoA[c] => 1 (S)-3-hydroxy-(5Z)-dodecenoyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-17797&oldid=27724"