Difference between revisions of "CALVIN-PWY"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5947 PWY-5947] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-47...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=CALVIN-PWY CALVIN-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TA...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Pathway]]
 
[[Category:Pathway]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5947 PWY-5947] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=CALVIN-PWY CALVIN-PWY] ==
 
* taxonomic range:
 
* taxonomic range:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
 
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2763 TAX-2763]
 
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3041 TAX-3041]
 
 
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-1117]
 
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-1117]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-39119 TAX-39119]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-38254 TAX-38254]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-29197 TAX-29197]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-38410 TAX-38410]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-5747 TAX-5747]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2864 TAX-2864]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-877183 TAX-877183]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2836 TAX-2836]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3027 TAX-3027]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2830 TAX-2830]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2833 TAX-2833]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3041 TAX-3041]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33682 TAX-33682]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2763 TAX-2763]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2870 TAX-2870]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2825 TAX-2825]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
 
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
 
* common name:
 
* common name:
−
** lutein biosynthesis
+
** Calvin-Benson-Bassham cycle
 
* Synonym(s):
 
* Synonym(s):
 +
** photosynthetic dark reactions
 +
** photosynthetic CO2 fixation
 +
** reductive pentose phosphate pathway
 +
** Calvin cycle
 +
** carbon fixation
 +
** Calvin-Benson cycle
  
 
== Reaction(s) found ==
 
== Reaction(s) found ==
−
* '''1''' reaction(s) found
+
'''13''' reactions found over '''13''' reactions in the full pathway
−
** [[RXN1F-148]]
+
* [[1.2.1.13-RXN]]
 +
** 0 associated gene:
 +
** 1 reconstruction source(s) associated:
 +
*** [[annotation-esiliculosus_genome]]
 +
* [[1TRANSKETO-RXN]]
 +
** 1 associated gene(s):
 +
*** [[Ec-20_002600]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-esiliculosus_genome]]
 +
*** [[orthology-aragem]]
 +
* [[2TRANSKETO-RXN]]
 +
** 1 associated gene(s):
 +
*** [[Ec-20_002600]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-esiliculosus_genome]]
 +
*** [[orthology-aragem]]
 +
* [[F16ALDOLASE-RXN]]
 +
** 4 associated gene(s):
 +
*** [[Ec-10_004980]]
 +
*** [[Ec-01_008040]]
 +
*** [[Ec-10_000880]]
 +
*** [[Ec-14_001680]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[annotation-esiliculosus_genome]]
 +
* [[F16BDEPHOS-RXN]]
 +
** 7 associated gene(s):
 +
*** [[Ec-06_004200]]
 +
*** [[Ec-04_004710]]
 +
*** [[Ec-17_003090]]
 +
*** [[Ec-12_004070]]
 +
*** [[Ec-14_005760]]
 +
*** [[Ec-22_000360]]
 +
*** [[Ec-21_001790]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-esiliculosus_genome]]
 +
*** [[orthology-aragem]]
 +
* [[PHOSGLYPHOS-RXN]]
 +
** 6 associated gene(s):
 +
*** [[Ec-12_004530]]
 +
*** [[Ec-21_005710]]
 +
*** [[Ec-21_004220]]
 +
*** [[Ec-08_002400]]
 +
*** [[Ec-12_004550]]
 +
*** [[Ec-01_001350]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-esiliculosus_genome]]
 +
*** [[orthology-aragem]]
 +
* [[PHOSPHORIBULOKINASE-RXN]]
 +
** 2 associated gene(s):
 +
*** [[Ec-27_003910]]
 +
*** [[Ec-26_002450]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-esiliculosus_genome]]
 +
*** [[orthology-aragem]]
 +
* [[RIB5PISOM-RXN]]
 +
** 1 associated gene(s):
 +
*** [[Ec-08_003540]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-esiliculosus_genome]]
 +
*** [[orthology-aragem]]
 +
* [[RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN]]
 +
** 1 associated gene(s):
 +
*** [[Ec-12_007560]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[annotation-esiliculosus_genome]]
 +
* [[RIBULP3EPIM-RXN]]
 +
** 2 associated gene(s):
 +
*** [[Ec-07_002390]]
 +
*** [[Ec-27_003930]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-esiliculosus_genome]]
 +
*** [[orthology-aragem]]
 +
* [[SEDOBISALDOL-RXN]]
 +
** 1 associated gene(s):
 +
*** [[Ec-10_004980]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-esiliculosus_genome]]
 +
*** [[orthology-aragem]]
 +
* [[SEDOHEPTULOSE-BISPHOSPHATASE-RXN]]
 +
** 3 associated gene(s):
 +
*** [[Ec-04_004710]]
 +
*** [[Ec-21_001790]]
 +
*** [[Ec-22_000360]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-esiliculosus_genome]]
 +
*** [[orthology-aragem]]
 +
* [[TRIOSEPISOMERIZATION-RXN]]
 +
** 4 associated gene(s):
 +
*** [[Ec-08_000500]]
 +
*** [[Ec-24_000360]]
 +
*** [[Ec-03_002790]]
 +
*** [[Ec-23_004160]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-esiliculosus_genome]]
 +
*** [[orthology-aragem]]
 
== Reaction(s) not found ==
 
== Reaction(s) not found ==
−
* '''2''' reaction(s) not found
 
−
** [http://metacyc.org/META/NEW-IMAGE?object=RXN-5961 RXN-5961]
 
−
** [http://metacyc.org/META/NEW-IMAGE?object=RXN-5962 RXN-5962]
 
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-4751}}
+
* PLANTCYC : CALVIN-PWY
−
{{#set: taxonomic range=TAX-2763}}
+
* ARACYC:
−
{{#set: taxonomic range=TAX-3041}}
+
** [http://metacyc.org/ARA/NEW-IMAGE?object=CALVIN-PWY CALVIN-PWY]
 
{{#set: taxonomic range=TAX-1117}}
 
{{#set: taxonomic range=TAX-1117}}
 +
{{#set: taxonomic range=TAX-39119}}
 +
{{#set: taxonomic range=TAX-38254}}
 +
{{#set: taxonomic range=TAX-29197}}
 +
{{#set: taxonomic range=TAX-38410}}
 +
{{#set: taxonomic range=TAX-5747}}
 +
{{#set: taxonomic range=TAX-2864}}
 +
{{#set: taxonomic range=TAX-877183}}
 +
{{#set: taxonomic range=TAX-2836}}
 +
{{#set: taxonomic range=TAX-3027}}
 +
{{#set: taxonomic range=TAX-2830}}
 +
{{#set: taxonomic range=TAX-2833}}
 +
{{#set: taxonomic range=TAX-3041}}
 +
{{#set: taxonomic range=TAX-33682}}
 +
{{#set: taxonomic range=TAX-2763}}
 +
{{#set: taxonomic range=TAX-2870}}
 +
{{#set: taxonomic range=TAX-2825}}
 +
{{#set: taxonomic range=TAX-2}}
 
{{#set: taxonomic range=TAX-33090}}
 
{{#set: taxonomic range=TAX-33090}}
−
{{#set: common name=lutein biosynthesis}}
+
{{#set: common name=Calvin-Benson-Bassham cycle}}
−
{{#set: reaction found=1}}
+
{{#set: common name=photosynthetic dark reactions|photosynthetic CO2 fixation|reductive pentose phosphate pathway|Calvin cycle|carbon fixation|Calvin-Benson cycle}}
−
{{#set: reaction not found=2}}
+
{{#set: reaction found=13}}
 +
{{#set: total reaction=13}}
 +
{{#set: completion rate=100.0}}

Latest revision as of 19:09, 21 March 2018

Pathway CALVIN-PWY

Reaction(s) found

13 reactions found over 13 reactions in the full pathway

Reaction(s) not found

External links













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