Difference between revisions of "Ec-19 000030"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7775 RXN-7775] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1....")
 
(Created page with "Category:Gene == Gene Ec-19_000030 == * left end position: ** 36349 * transcription direction: ** NEGATIVE * right end position: ** 44922 * centisome position: ** 0.608790...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7775 RXN-7775] ==
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== Gene Ec-19_000030 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 36349
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/1.14.11.9 EC-1.14.11.9]
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** NEGATIVE
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* right end position:
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** 44922
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* centisome position:
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** 0.6087908   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0328_0011
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** Esi0328_0011
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[GMP-REDUCT-RXN]]
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** 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[CPD-6994]][c] '''=>''' 1 [[SUC]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CPD-474]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 2-oxoglutarate[c] '''+''' 1 oxygen[c] '''+''' 1 (2S)-eriodictyol[c] '''=>''' 1 succinate[c] '''+''' 1 CO2[c] '''+''' 1 (+)-taxifolin[c]
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* Reaction: [[IMP-DEHYDROG-RXN]]
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** Source: [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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*** Assignment: automated-name-match
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Genes have been associated with this reaction based on different elements listed below.
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** Source: [[orthology-aragem]]
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* [[Ec-19_002760]]
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== Pathways associated ==
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** [[pantograph]]-[[aragem]]
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* [[PWY-7221]]
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* [[Ec-08_003510]]
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* [[PWY-5695]]
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** [[pantograph]]-[[aragem]]
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* [[PWY-6596]]
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* [[Ec-19_002750]]
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** [[pantograph]]-[[aragem]]
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== Pathways ==
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* [[PWY1F-823]], leucopelargonidin and leucocyanidin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY1F-823 PWY1F-823]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-6787]], flavonoid biosynthesis (in equisetum): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6787 PWY-6787]
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** '''6''' reactions found over '''10''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[aragem]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: left end position=36349}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03640 R03640]
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{{#set: transcription direction=NEGATIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=44922}}
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{{#set: ec number=EC-1.14.11.9}}
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{{#set: centisome position=0.6087908    }}
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{{#set: gene associated=Ec-19_002760|Ec-08_003510|Ec-19_002750}}
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{{#set: common name=Esi_0328_0011|Esi0328_0011}}
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{{#set: in pathway=PWY1F-823|PWY-6787}}
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{{#set: reaction associated=GMP-REDUCT-RXN|IMP-DEHYDROG-RXN}}
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{{#set: reconstruction category=orthology}}
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{{#set: pathway associated=PWY-7221|PWY-5695|PWY-6596}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=aragem}}
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Latest revision as of 19:09, 21 March 2018

Gene Ec-19_000030

  • left end position:
    • 36349
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 44922
  • centisome position:
    • 0.6087908
  • Synonym(s):
    • Esi_0328_0011
    • Esi0328_0011

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-19_000030&oldid=24913"