Difference between revisions of "RXN-15131"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=POLYAMINSYN3-PWY POLYAMINSYN3-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15131 RXN-15131] == * direction: ** LEFT-TO-RIGHT * common name: ** Cys/Met metabolism, pyridox...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Pathway]]
+
[[Category:Reaction]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=POLYAMINSYN3-PWY POLYAMINSYN3-PWY] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15131 RXN-15131] ==
−
* taxonomic range:
+
* direction:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
+
** LEFT-TO-RIGHT
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
+
 
* common name:
 
* common name:
−
** superpathway of polyamine biosynthesis II
+
** Cys/Met metabolism, pyridoxal phosphate-dependent enzyme
 +
** Cystathionine beta-lyase
 
* Synonym(s):
 
* Synonym(s):
−
** polyamn
 
  
−
== Reaction(s) found ==
+
== Reaction Formula ==
−
'''4''' reactions found over '''7''' reactions in the full pathway
+
* With identifiers:
−
* [[BSUBPOLYAMSYN-PWY]]
+
** 1 [[L-CYSTATHIONINE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[2-AMINOACRYLATE]][c] '''+''' 1 [[HOMO-CYS]][c]
−
** 0 associated gene:
+
* With common name(s):
−
* [[PWY-43]]
+
** 1 L-cystathionine[c] '''=>''' 1 H+[c] '''+''' 1 2-aminoprop-2-enoate[c] '''+''' 1 L-homocysteine[c]
−
** 0 associated gene:
+
 
−
* [[PWY-46]]
+
== Genes associated with this reaction  ==
−
** 0 associated gene:
+
Genes have been associated with this reaction based on different elements listed below.
−
* [[SPERMINE-SYNTHASE-RXN]]
+
* Gene: [[Ec-00_002820]]
−
** 2 associated gene(s):
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[Ec-04_002790]]
+
*** Assignment: EC-NUMBER
−
*** [[Ec-17_001590]]
+
* Gene: [[Ec-05_006760]]
−
** 1 reconstruction source(s) associated:
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[annotation-esiliculosus_genome]]
+
*** Assignment: EC-NUMBER
−
== Reaction(s) not found ==
+
== Pathways  ==
 +
* [[HOMOSER-METSYN-PWY]], L-methionine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=HOMOSER-METSYN-PWY HOMOSER-METSYN-PWY]
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-801]], L-homocysteine and L-cysteine interconversion: [http://metacyc.org/META/NEW-IMAGE?object=PWY-801 PWY-801]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-702]], L-methionine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-702 PWY-702]
 +
** '''6''' reactions found over '''6''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* ARACYC:
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://metacyc.org/ARA/NEW-IMAGE?object=POLYAMINSYN3-PWY POLYAMINSYN3-PWY]
+
{{#set: common name=Cys/Met metabolism, pyridoxal phosphate-dependent enzyme}}
−
{{#set: taxonomic range=TAX-2759}}
+
{{#set: common name=Cystathionine beta-lyase}}
−
{{#set: taxonomic range=TAX-2}}
+
{{#set: gene associated=Ec-00_002820|Ec-05_006760}}
−
{{#set: common name=superpathway of polyamine biosynthesis II}}
+
{{#set: in pathway=HOMOSER-METSYN-PWY|PWY-801|PWY-702}}
−
{{#set: common name=polyamn}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reaction found=4}}
+
{{#set: reconstruction source=annotation-esiliculosus_genome}}
−
{{#set: total reaction=7}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: completion rate=57.0}}
+

Latest revision as of 19:35, 21 March 2018

Reaction RXN-15131

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Cys/Met metabolism, pyridoxal phosphate-dependent enzyme
    • Cystathionine beta-lyase
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • HOMOSER-METSYN-PWY, L-methionine biosynthesis I: HOMOSER-METSYN-PWY
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-801, L-homocysteine and L-cysteine interconversion: PWY-801
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-702, L-methionine biosynthesis II: PWY-702
    • 6 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-15131&oldid=28034"