Difference between revisions of "Ec-27 006890"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACYLCOADEHYDROG-RXN ACYLCOADEHYDROG-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** acyl-Co...")
(Created page with "Category:Gene == Gene Ec-27_006890 == * left end position: ** 6313735 * transcription direction: ** POSITIVE * right end position: ** 6318288 * centisome position: ** 97.8...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACYLCOADEHYDROG-RXN ACYLCOADEHYDROG-RXN] ==
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== Gene Ec-27_006890 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 6313735
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* common name:
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* transcription direction:
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** acyl-CoA dehydrogenase
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/1.3.8 EC-1.3.8]
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** 6318288
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* centisome position:
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** 97.88877   
 
* Synonym(s):
 
* Synonym(s):
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** fatty acyl coenzyme A dehydrogenase
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** Esi_0339_0011
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** acyl coenzyme A dehydrogenase
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** Esi0339_0011
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** fatty-acyl-CoA dehydrogenase
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** SAMDC
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** general acyl CoA dehydrogenase
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** medium-chain acyl-coenzyme A dehydrogenase
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** long-chain acyl coenzyme A dehydrogenase
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** long-chain acyl-CoA dehydrogenase
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[SAMDECARB-RXN]]
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** 1 [[Saturated-Fatty-Acyl-CoA]][c] '''+''' 1 [[ETF-Oxidized]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[ETF-Reduced]][c] '''+''' 1 [[TRANS-D2-ENOYL-COA]][c]
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* With common name(s):
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** 1 a 2,3,4-saturated fatty acyl CoA[c] '''+''' 1 an oxidized electron-transfer flavoprotein[c] '''+''' 1 H+[c] '''=>''' 1 a reduced electron-transfer flavoprotein[c] '''+''' 1 a trans-2-enoyl-CoA[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-16_004260]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-14_001600]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-03_003490]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-21_001100]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-06_008910]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-08_006390]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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== Pathways  ==
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* [[FAO-PWY]], fatty acid β-oxidation I: [http://metacyc.org/META/NEW-IMAGE?object=FAO-PWY FAO-PWY]
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** '''5''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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** Source: [[orthology-aragem]]
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== Pathways associated ==
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* [[BSUBPOLYAMSYN-PWY]]
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* [[ARGSPECAT-PWY]]
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* [[PWY-6834]]
 
== External links  ==
 
== External links  ==
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* UNIPROT:
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{{#set: left end position=6313735}}
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** [http://www.uniprot.org/uniprot/P16219 P16219]
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{{#set: transcription direction=POSITIVE}}
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** [http://www.uniprot.org/uniprot/P45952 P45952]
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{{#set: right end position=6318288}}
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** [http://www.uniprot.org/uniprot/P15651 P15651]
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{{#set: centisome position=97.88877    }}
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** [http://www.uniprot.org/uniprot/P11310 P11310]
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{{#set: common name=Esi_0339_0011|Esi0339_0011|SAMDC}}
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** [http://www.uniprot.org/uniprot/P08503 P08503]
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{{#set: reaction associated=SAMDECARB-RXN}}
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** [http://www.uniprot.org/uniprot/Q07417 Q07417]
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{{#set: pathway associated=BSUBPOLYAMSYN-PWY|ARGSPECAT-PWY|PWY-6834}}
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** [http://www.uniprot.org/uniprot/Q54857 Q54857]
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** [http://www.uniprot.org/uniprot/P45867 P45867]
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** [http://www.uniprot.org/uniprot/Q9X3R3 Q9X3R3]
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** [http://www.uniprot.org/uniprot/Q9R9I6 Q9R9I6]
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** [http://www.uniprot.org/uniprot/Q96329 Q96329]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=acyl-CoA dehydrogenase}}
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{{#set: ec number=EC-1.3.8}}
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{{#set: common name=fatty acyl coenzyme A dehydrogenase|acyl coenzyme A dehydrogenase|fatty-acyl-CoA dehydrogenase|general acyl CoA dehydrogenase|medium-chain acyl-coenzyme A dehydrogenase|long-chain acyl coenzyme A dehydrogenase|long-chain acyl-CoA dehydrogenase}}
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{{#set: gene associated=Ec-16_004260|Ec-14_001600|Ec-03_003490|Ec-21_001100|Ec-06_008910|Ec-08_006390}}
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{{#set: in pathway=FAO-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:36, 21 March 2018

Gene Ec-27_006890

  • left end position:
    • 6313735
  • transcription direction:
    • POSITIVE
  • right end position:
    • 6318288
  • centisome position:
    • 97.88877
  • Synonym(s):
    • Esi_0339_0011
    • Esi0339_0011
    • SAMDC

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-27_006890&oldid=28120"