Difference between revisions of "RXN-9644"

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(Created page with "Category:Gene == Gene Ec-07_006660 == * left end position: ** 6407130 * transcription direction: ** POSITIVE * right end position: ** 6413630 * centisome position: ** 82.9...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9644 RXN-9644] == * direction: ** LEFT-TO-RIGHT * common name: ** long chain acyl-coA synthetas...")
 
(One intermediate revision by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Ec-07_006660 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9644 RXN-9644] ==
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* left end position:
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* direction:
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** 6407130
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** long chain acyl-coA synthetase
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* right end position:
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** long chain acyl-CoA synthetase
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** 6413630
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
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** 82.9678   
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* Synonym(s):
 
* Synonym(s):
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** Esi_0110_0075
 
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** Esi0110_0075
 
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** PKS
 
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[NARINGENIN-CHALCONE-SYNTHASE-RXN]]
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* With identifiers:
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** [[pantograph]]-[[aragem]]
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** 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[OLEATE-CPD]][c] '''=>''' 1 [[OLEOYL-COA]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c]
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* [[RXN-10734]]
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* With common name(s):
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** esiliculosus_genome
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** 1 ATP[c] '''+''' 1 coenzyme A[c] '''+''' 1 oleate[c] '''=>''' 1 oleoyl-CoA[c] '''+''' 1 diphosphate[c] '''+''' 1 AMP[c]
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***automated-name-match
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* [[RXN-7645]]
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== Genes associated with this reaction  ==
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** [[pantograph]]-[[aragem]]
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Genes have been associated with this reaction based on different elements listed below.
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== Pathways associated ==
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* Gene: [[Ec-02_006430]]
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* [[PWY-5059]]
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** Source: [[annotation-esiliculosus_genome]]
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* [[PWY1F-FLAVSYN]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* [[PWY-6787]]
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* Gene: [[Ec-03_003710]]
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* [[PWY-7397]]
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** Source: [[annotation-esiliculosus_genome]]
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* [[PWY-6316]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* [[PWY-5135]]
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* Gene: [[Ec-01_001560]]
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* [[PWY-6312]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-12_008720]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY-5147]], oleate biosynthesis I (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5147 PWY-5147]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-6001]], linoleate biosynthesis II (animals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6001 PWY-6001]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=6407130}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=long chain acyl-coA synthetase}}
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{{#set: right end position=6413630}}
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{{#set: common name=long chain acyl-CoA synthetase}}
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{{#set: centisome position=82.9678    }}
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{{#set: ec number=EC-6.2.1.3}}
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{{#set: common name=Esi_0110_0075|Esi0110_0075|PKS}}
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{{#set: gene associated=Ec-02_006430|Ec-03_003710|Ec-01_001560|Ec-12_008720}}
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{{#set: reaction associated=NARINGENIN-CHALCONE-SYNTHASE-RXN|RXN-10734|RXN-7645}}
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{{#set: in pathway=PWY-5147|PWY-6001}}
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{{#set: pathway associated=PWY-5059|PWY1F-FLAVSYN|PWY-6787|PWY-7397|PWY-6316|PWY-5135|PWY-6312}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:36, 21 March 2018

Reaction RXN-9644

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • long chain acyl-coA synthetase
    • long chain acyl-CoA synthetase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 coenzyme A[c] + 1 oleate[c] => 1 oleoyl-CoA[c] + 1 diphosphate[c] + 1 AMP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5147, oleate biosynthesis I (plants): PWY-5147
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-6001, linoleate biosynthesis II (animals): PWY-6001
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-9644&oldid=28156"