Difference between revisions of "RXN-15122"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=ALPHA-TOCOPHEROL ALPHA-TOCOPHEROL] == * smiles: ** CC(C)CCCC(C)CCCC(C)CCCC1(C)(CCC2(=C(C(O)=C(C...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15122 RXN-15122] == * direction: ** LEFT-TO-RIGHT * common name: ** Tryptophan synthase beta su...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=ALPHA-TOCOPHEROL ALPHA-TOCOPHEROL] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15122 RXN-15122] ==
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* smiles:
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* direction:
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** CC(C)CCCC(C)CCCC(C)CCCC1(C)(CCC2(=C(C(O)=C(C)C(=C(O1)2)C)C))
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=GVJHHUAWPYXKBD-IEOSBIPESA-N
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* common name:
 
* common name:
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** α-tocopherol
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** Tryptophan synthase beta subunit-like PLP-dependent enzyme
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* molecular weight:
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** L-threonine ammonia-lyase
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** 430.713   
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* Synonym(s):
 
* Synonym(s):
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** (2R,4'R,8'R)-α-tocopherol
 
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** (R,R,R)-α-tocopherol
 
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** 5,7,8-trimethyltocol
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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* [[TOCOPHEROL-O-METHYLTRANSFERASE-RXN]]
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** 1 [[THR]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-15056]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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** 1 L-threonine[c] '''=>''' 1 H2O[c] '''+''' 1 H+[c] '''+''' 1 (2Z)-2-aminobut-2-enoate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-06_007490]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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* Gene: [[Ec-03_001910]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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== Pathways  ==
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* [[ILEUSYN-PWY]], L-isoleucine biosynthesis I (from threonine): [http://metacyc.org/META/NEW-IMAGE?object=ILEUSYN-PWY ILEUSYN-PWY]
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** '''7''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-5826]], hypoglycin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5826 PWY-5826]
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** '''4''' reactions found over '''14''' reactions in the full pathway
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* [[PWY-5437]], L-threonine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5437 PWY-5437]
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** '''3''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* DRUGBANK : DB00163
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{{#set: direction=LEFT-TO-RIGHT}}
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* NCI:
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{{#set: common name=Tryptophan synthase beta subunit-like PLP-dependent enzyme}}
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** [http://cactus.nci.nih.gov/ncidb2.2/?nsc=82623 82623]
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{{#set: common name=L-threonine ammonia-lyase}}
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* CAS : 2074-53-5
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{{#set: gene associated=Ec-06_007490|Ec-03_001910}}
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* LIPID_MAPS : LMPR02020001
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{{#set: in pathway=ILEUSYN-PWY|PWY-5826|PWY-5437}}
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* PUBCHEM:
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{{#set: reconstruction category=annotation}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=14985 14985]
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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* HMDB : HMDB01893
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{{#set: reconstruction tool=pathwaytools}}
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* LIGAND-CPD:
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** [http://www.genome.jp/dbget-bin/www_bget?C02477 C02477]
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* CHEMSPIDER:
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** [http://www.chemspider.com/Chemical-Structure.14265.html 14265]
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* CHEBI:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=18145 18145]
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* METABOLIGHTS : MTBLC18145
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{{#set: smiles=CC(C)CCCC(C)CCCC(C)CCCC1(C)(CCC2(=C(C(O)=C(C)C(=C(O1)2)C)C))}}
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{{#set: inchi key=InChIKey=GVJHHUAWPYXKBD-IEOSBIPESA-N}}
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{{#set: common name=α-tocopherol}}
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{{#set: molecular weight=430.713    }}
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{{#set: common name=(2R,4'R,8'R)-α-tocopherol|(R,R,R)-α-tocopherol|5,7,8-trimethyltocol}}
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{{#set: produced by=TOCOPHEROL-O-METHYLTRANSFERASE-RXN}}
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Latest revision as of 19:37, 21 March 2018

Reaction RXN-15122

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Tryptophan synthase beta subunit-like PLP-dependent enzyme
    • L-threonine ammonia-lyase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 L-threonine[c] => 1 H2O[c] + 1 H+[c] + 1 (2Z)-2-aminobut-2-enoate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • ILEUSYN-PWY, L-isoleucine biosynthesis I (from threonine): ILEUSYN-PWY
    • 7 reactions found over 7 reactions in the full pathway
  • PWY-5826, hypoglycin biosynthesis: PWY-5826
    • 4 reactions found over 14 reactions in the full pathway
  • PWY-5437, L-threonine degradation I: PWY-5437
    • 3 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-15122&oldid=28191"