Difference between revisions of "Ec-07 005770"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14971 RXN-14971] == * direction: ** LEFT-TO-RIGHT * common name: ** Succinate dehydrogenase/fum...")
(Created page with "Category:Gene == Gene Ec-07_005770 == * left end position: ** 5636448 * transcription direction: ** POSITIVE * right end position: ** 5642249 * centisome position: ** 72.9...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14971 RXN-14971] ==
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== Gene Ec-07_005770 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 5636448
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* common name:
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* transcription direction:
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** Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
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** POSITIVE
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** SDH1, succinate dehydrogenase subunit 1
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* right end position:
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** SDH3, succinate dehydrogenase subunit 3
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** 5642249
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** SDH2, succinate dehydrogenase subunit 2
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* centisome position:
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** SDH4, succinate dehydrogenase subunit 4
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** 72.98800   
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* ec number:
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** [http://enzyme.expasy.org/EC/1.3.5.1 EC-1.3.5.1]
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* Synonym(s):
 
* Synonym(s):
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** Esi_0148_0015
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** Esi0148_0015
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[RIBOFLAVINSYNDEAM-RXN]]
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** 1 [[SUC]][c] '''+''' 1 [[ETR-Quinones]][c] '''=>''' 1 [[ETR-Quinols]][c] '''+''' 1 [[FUM]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: go-term
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** 1 succinate[c] '''+''' 1 an electron-transfer quinone[c] '''=>''' 1 an electron-transfer quinol[c] '''+''' 1 fumarate[c]
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** Source: [[orthology-aragem]]
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* Reaction: [[RIBOFLAVINSYNREDUC-RXN]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-07_007310]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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* [[Ec-27_006560]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-07_002870]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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* [[Ec-11_000360]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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* [[Ec-05_003640]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-21_003470]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-7254]], TCA cycle VII (acetate-producers): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7254 PWY-7254]
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** '''7''' reactions found over '''9''' reactions in the full pathway
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* [[P105-PWY]], TCA cycle IV (2-oxoglutarate decarboxylase): [http://metacyc.org/META/NEW-IMAGE?object=P105-PWY P105-PWY]
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** '''9''' reactions found over '''11''' reactions in the full pathway
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* [[PWY-6969]], TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6969 PWY-6969]
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** '''10''' reactions found over '''12''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: go-term
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** Source: [[orthology-aragem]]
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== Pathways associated ==
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* [[RIBOSYN2-PWY]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=5636448}}
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{{#set: common name=Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=SDH1, succinate dehydrogenase subunit 1}}
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{{#set: right end position=5642249}}
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{{#set: common name=SDH3, succinate dehydrogenase subunit 3}}
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{{#set: centisome position=72.98800    }}
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{{#set: common name=SDH2, succinate dehydrogenase subunit 2}}
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{{#set: common name=Esi_0148_0015|Esi0148_0015}}
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{{#set: common name=SDH4, succinate dehydrogenase subunit 4}}
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{{#set: reaction associated=RIBOFLAVINSYNDEAM-RXN|RIBOFLAVINSYNREDUC-RXN}}
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{{#set: ec number=EC-1.3.5.1}}
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{{#set: pathway associated=RIBOSYN2-PWY}}
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{{#set: gene associated=Ec-07_007310|Ec-27_006560|Ec-07_002870|Ec-11_000360|Ec-05_003640|Ec-21_003470}}
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{{#set: in pathway=PWY-7254|P105-PWY|PWY-6969}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:37, 21 March 2018

Gene Ec-07_005770

  • left end position:
    • 5636448
  • transcription direction:
    • POSITIVE
  • right end position:
    • 5642249
  • centisome position:
    • 72.98800
  • Synonym(s):
    • Esi_0148_0015
    • Esi0148_0015

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-07_005770&oldid=28275"