Difference between revisions of "CHOLINE-KINASE-RXN"

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(Created page with "Category:Gene == Gene Ec-02_003100 == * left end position: ** 3429694 * transcription direction: ** NEGATIVE * right end position: ** 3439284 * centisome position: ** 52.5...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CHOLINE-KINASE-RXN CHOLINE-KINASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** choline/e...")
 
(One intermediate revision by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Ec-02_003100 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CHOLINE-KINASE-RXN CHOLINE-KINASE-RXN] ==
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* left end position:
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* direction:
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** 3429694
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** NEGATIVE
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** choline/ethanolamine kinase
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* right end position:
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* ec number:
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** 3439284
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** [http://enzyme.expasy.org/EC/2.7.1.32 EC-2.7.1.32]
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* centisome position:
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** 52.539886   
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* Synonym(s):
 
* Synonym(s):
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** Esi_0209_0031
 
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** Esi0209_0031
 
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** MDH
 
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[MALATE-DEH-RXN]]
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* With identifiers:
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** esiliculosus_genome
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** 1 [[ATP]][c] '''+''' 1 [[CHOLINE]][c] '''=>''' 1 [[PHOSPHORYL-CHOLINE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ADP]][c]
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***ec-number
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* With common name(s):
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** [[pantograph]]-[[aragem]]
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** 1 ATP[c] '''+''' 1 choline[c] '''=>''' 1 phosphocholine[c] '''+''' 1 H+[c] '''+''' 1 ADP[c]
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** [[pantograph]]-[[aragem]]
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** [[pantograph]]-[[aragem]]
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== Genes associated with this reaction  ==
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** [[pantograph]]-[[aragem]]
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Genes have been associated with this reaction based on different elements listed below.
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== Pathways associated ==
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* Gene: [[Ec-16_004110]]
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* [[FERMENTATION-PWY]]
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** Source: [[annotation-esiliculosus_genome]]
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* [[PWY-561]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* [[PWY-5913]]
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== Pathways  ==
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* [[PWY-1622]]
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* [[PWY-7782]], plasmalogen biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7782 PWY-7782]
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* [[GLUCONEO-PWY]]
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** '''6''' reactions found over '''16''' reactions in the full pathway
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* [[P42-PWY]]
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* [[PWY3O-450]], phosphatidylcholine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY3O-450 PWY3O-450]
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* [[PWY-7383]]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-5690]]
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== Reconstruction information  ==
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* [[PWY-5392]]
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* Category: [[annotation]]
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* [[TCA]]
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** Source: [[annotation-esiliculosus_genome]]
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* [[P23-PWY]]
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*** Tool: [[pathwaytools]]
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* [[P105-PWY]]
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* [[GLYOXYLATE-BYPASS]]
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* [[PWY-6969]]
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* [[PWY-6728]]
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* [[PWY-7115]]
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* [[P108-PWY]]
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* [[MALATE-ASPARTATE-SHUTTLE-PWY]]
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* [[PWY66-398]]
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* [[PWY66-399]]
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== External links  ==
 
== External links  ==
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{{#set: left end position=3429694}}
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* RHEA:
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12837 12837]
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{{#set: right end position=3439284}}
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* LIGAND-RXN:
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{{#set: centisome position=52.539886    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R01021 R01021]
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{{#set: common name=Esi_0209_0031|Esi0209_0031|MDH}}
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* UNIPROT:
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{{#set: reaction associated=MALATE-DEH-RXN}}
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** [http://www.uniprot.org/uniprot/P20485 P20485]
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{{#set: pathway associated=FERMENTATION-PWY|PWY-561|PWY-5913|PWY-1622|GLUCONEO-PWY|P42-PWY|PWY-7383|PWY-5690|PWY-5392|TCA|P23-PWY|P105-PWY|GLYOXYLATE-BYPASS|PWY-6969|PWY-6728|PWY-7115|P108-PWY|MALATE-ASPARTATE-SHUTTLE-PWY|PWY66-398|PWY66-399}}
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** [http://www.uniprot.org/uniprot/Q01134 Q01134]
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** [http://www.uniprot.org/uniprot/Q42809 Q42809]
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** [http://www.uniprot.org/uniprot/Q42810 Q42810]
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** [http://www.uniprot.org/uniprot/Q42811 Q42811]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=choline/ethanolamine kinase}}
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{{#set: ec number=EC-2.7.1.32}}
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{{#set: gene associated=Ec-16_004110}}
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{{#set: in pathway=PWY-7782|PWY3O-450}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:38, 21 March 2018

Reaction CHOLINE-KINASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • choline/ethanolamine kinase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7782, plasmalogen biosynthesis: PWY-7782
    • 6 reactions found over 16 reactions in the full pathway
  • PWY3O-450, phosphatidylcholine biosynthesis I: PWY3O-450
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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