Difference between revisions of "FARNESYLTRANSTRANSFERASE-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=L-DEHYDRO-ASCORBATE L-DEHYDRO-ASCORBATE] == * smiles: ** C(O)C(O)C1(C(=O)C(=O)C(=O)O1) * inchi...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=FARNESYLTRANSTRANSFERASE-RXN FARNESYLTRANSTRANSFERASE-RXN] == * direction: ** LEFT-TO-RIGHT * commo...")
 
(One intermediate revision by the same user not shown)
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=L-DEHYDRO-ASCORBATE L-DEHYDRO-ASCORBATE] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=FARNESYLTRANSTRANSFERASE-RXN FARNESYLTRANSTRANSFERASE-RXN] ==
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* smiles:
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* direction:
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** C(O)C(O)C1(C(=O)C(=O)C(=O)O1)
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=SBJKKFFYIZUCET-SZSCBOSDSA-N
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* common name:
 
* common name:
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** L-dehydro-ascorbate
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** Geranylgeranyl pyrophosphate synthetase, chloroplast precursor;
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* molecular weight:
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** geranylgeranyl pyrophosphate synthase, chloroplast precursor
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** 174.11   
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* ec number:
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** [http://enzyme.expasy.org/EC/2.5.1.29 EC-2.5.1.29]
 
* Synonym(s):
 
* Synonym(s):
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** dehydroascorbate
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN-12862]]
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* With identifiers:
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* [[RXN-12869]]
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** 1 [[FARNESYL-PP]][c] '''+''' 1 [[DELTA3-ISOPENTENYL-PP]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[GERANYLGERANYL-PP]][c]
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* [[1.8.5.1-RXN]]
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* With common name(s):
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== Reaction(s) known to produce the compound ==
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** 1 (2E,6E)-farnesyl diphosphate[c] '''+''' 1 isopentenyl diphosphate[c] '''=>''' 1 diphosphate[c] '''+''' 1 geranylgeranyl diphosphate[c]
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* [[DOPAMINE-BETA-MONOOXYGENASE-RXN]]
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* [[RXN-3523]]
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== Genes associated with this reaction  ==
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* [[RXN-12440]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[RXN-12876]]
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* Gene: [[Ec-16_004320]]
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== Reaction(s) of unknown directionality ==
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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* Gene: [[Ec-16_004330]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-aragem]]
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== Pathways  ==
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* [[PWY-7736]], stellatic acid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7736 PWY-7736]
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** '''3''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-7492]], paspaline biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7492 PWY-7492]
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** '''1''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-6659]], fusicoccin A biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6659 PWY-6659]
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** '''1''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-6691]], plaunotol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6691 PWY-6691]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-5120]], geranylgeranyl diphosphate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5120 PWY-5120]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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* [[PWY-7720]], ophiobolin F biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7720 PWY-7720]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-7721]], methyl phomopsenoate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7721 PWY-7721]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-7517]], brassicicene C biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7517 PWY-7517]
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** '''1''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* LIGAND-CPD:
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* RHEA:
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** [http://www.genome.jp/dbget-bin/www_bget?C05422 C05422]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17653 17653]
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* CHEBI:
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* LIGAND-RXN:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=58070 58070]
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** [http://www.genome.jp/dbget-bin/www_bget?R02061 R02061]
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* METABOLIGHTS : MTBLC58070
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* UNIPROT:
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* PUBCHEM:
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** [http://www.uniprot.org/uniprot/P39464 P39464]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=15558810 15558810]
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** [http://www.uniprot.org/uniprot/P24322 P24322]
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* HMDB : HMDB01264
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** [http://www.uniprot.org/uniprot/P80042 P80042]
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{{#set: smiles=C(O)C(O)C1(C(=O)C(=O)C(=O)O1)}}
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** [http://www.uniprot.org/uniprot/Q12051 Q12051]
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{{#set: inchi key=InChIKey=SBJKKFFYIZUCET-SZSCBOSDSA-N}}
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** [http://www.uniprot.org/uniprot/P95999 P95999]
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{{#set: common name=L-dehydro-ascorbate}}
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** [http://www.uniprot.org/uniprot/P48368 P48368]
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{{#set: molecular weight=174.11    }}
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** [http://www.uniprot.org/uniprot/P93227 P93227]
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{{#set: common name=dehydroascorbate}}
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** [http://www.uniprot.org/uniprot/P93228 P93228]
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{{#set: consumed by=RXN-12862|RXN-12869|1.8.5.1-RXN}}
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** [http://www.uniprot.org/uniprot/Q42698 Q42698]
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{{#set: produced by=DOPAMINE-BETA-MONOOXYGENASE-RXN|RXN-3523|RXN-12440|RXN-12876}}
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** [http://www.uniprot.org/uniprot/Q43133 Q43133]
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** [http://www.uniprot.org/uniprot/Q42866 Q42866]
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** [http://www.uniprot.org/uniprot/P54976 P54976]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Geranylgeranyl pyrophosphate synthetase, chloroplast precursor;}}
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{{#set: common name=geranylgeranyl pyrophosphate synthase, chloroplast precursor}}
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{{#set: ec number=EC-2.5.1.29}}
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{{#set: gene associated=Ec-16_004320|Ec-16_004330}}
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{{#set: in pathway=PWY-7736|PWY-7492|PWY-6659|PWY-6691|PWY-5120|PWY-7720|PWY-7721|PWY-7517}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:38, 21 March 2018

Reaction FARNESYLTRANSTRANSFERASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Geranylgeranyl pyrophosphate synthetase, chloroplast precursor;
    • geranylgeranyl pyrophosphate synthase, chloroplast precursor
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7736, stellatic acid biosynthesis: PWY-7736
    • 3 reactions found over 8 reactions in the full pathway
  • PWY-7492, paspaline biosynthesis: PWY-7492
    • 1 reactions found over 6 reactions in the full pathway
  • PWY-6659, fusicoccin A biosynthesis: PWY-6659
    • 1 reactions found over 8 reactions in the full pathway
  • PWY-6691, plaunotol biosynthesis: PWY-6691
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-5120, geranylgeranyl diphosphate biosynthesis: PWY-5120
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-7720, ophiobolin F biosynthesis: PWY-7720
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-7721, methyl phomopsenoate biosynthesis: PWY-7721
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-7517, brassicicene C biosynthesis: PWY-7517
    • 1 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





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