Difference between revisions of "RXN-14136"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11375 RXN-11375] == * direction: ** LEFT-TO-RIGHT * common name: ** Ceramidase * ec number: **...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14136 RXN-14136] == * direction: ** LEFT-TO-RIGHT * common name: ** glycerophosphodiester phosp...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11375 RXN-11375] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14136 RXN-14136] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** Ceramidase
+
** glycerophosphodiester phosphodiesterase
 
* ec number:
 
* ec number:
** [http://enzyme.expasy.org/EC/3.5.1.23 EC-3.5.1.23]
+
** [http://enzyme.expasy.org/EC/3.1.4.46 EC-3.1.4.46]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[Ceramides]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Fatty-Acids]][c] '''+''' 1 [[Sphingoids]][c]
+
** 1 [[WATER]][c] '''+''' 1 [[CPD0-2030]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[GLYCEROL-3P]][c] '''+''' 1 [[SER]][c]
 
* With common name(s):
 
* With common name(s):
** 1 a ceramide[c] '''+''' 1 H2O[c] '''=>''' 1 a fatty acid[c] '''+''' 1 a sphingoid base[c]
+
** 1 H2O[c] '''+''' 1 glycerophosphoserine[c] '''=>''' 1 H+[c] '''+''' 1 sn-glycerol 3-phosphate[c] '''+''' 1 L-serine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[Ec-26_006010]]
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* Gene: [[Ec-23_002720]]
** ESILICULOSUS_GENOME
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** Source: [[annotation-esiliculosus_genome]]
***AUTOMATED-NAME-MATCH
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*** Assignment: GO-TERM
 +
* Gene: [[Ec-23_002410]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 
== Pathways  ==
 
== Pathways  ==
* [[PWY-6483]], ceramide degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6483 PWY-6483]
 
** '''1''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
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*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29878 29878]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=Ceramidase}}
+
{{#set: common name=glycerophosphodiester phosphodiesterase}}
{{#set: ec number=EC-3.5.1.23}}
+
{{#set: ec number=EC-3.1.4.46}}
{{#set: gene associated=Ec-26_006010}}
+
{{#set: gene associated=Ec-23_002720|Ec-23_002410}}
{{#set: in pathway=PWY-6483}}
+
{{#set: in pathway=}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:39, 21 March 2018

Reaction RXN-14136

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • glycerophosphodiester phosphodiesterase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 glycerophosphoserine[c] => 1 H+[c] + 1 sn-glycerol 3-phosphate[c] + 1 L-serine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links