Difference between revisions of "6.3.5.6-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14264 RXN-14264] == * direction: ** REVERSIBLE * common name: ** isovaleryl-CoA dehydrogenase *...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=6.3.5.6-RXN 6.3.5.6-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Asparaginyl-tRNA Synthe...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14264 RXN-14264] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=6.3.5.6-RXN 6.3.5.6-RXN] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** isovaleryl-CoA dehydrogenase
+
** Asparaginyl-tRNA Synthetase
 +
** Glutathione S-transferase, C-terminal
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.3.8.4 EC-1.3.8.4]
+
** [http://enzyme.expasy.org/EC/6.3.5.6 EC-6.3.5.6]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ISOVALERYL-COA]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[FAD]][c] '''<=>''' 1 [[FADH2]][c] '''+''' 1 [[3-METHYL-CROTONYL-COA]][c]
+
** 1 [[GLN]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[L-aspartyl-tRNAAsn]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Charged-ASN-tRNAs]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[GLT]][c] '''+''' 1 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 isovaleryl-CoA[c] '''+''' 1 H+[c] '''+''' 1 FAD[c] '''<=>''' 1 FADH2[c] '''+''' 1 3-methylcrotonyl-CoA[c]
+
** 1 L-glutamine[c] '''+''' 1 ATP[c] '''+''' 1 an L-aspartyl-[tRNAAsn][c] '''+''' 1 H2O[c] '''=>''' 1 an L-asparaginyl-[tRNAasn][c] '''+''' 1 phosphate[c] '''+''' 1 ADP[c] '''+''' 1 L-glutamate[c] '''+''' 1 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-14_006780]]
+
* Gene: [[Ec-16_001810]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***AUTOMATED-NAME-MATCH
+
*** Assignment: EC-NUMBER
−
* [[Ec-08_006390]]
+
* Gene: [[Ec-17_000510]]
−
** [[pantograph]]-[[aragem]]
+
** Source: [[annotation-esiliculosus_genome]]
−
* [[Ec-03_003490]]
+
*** Assignment: EC-NUMBER
−
** [[pantograph]]-[[aragem]]
+
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY490-4]], L-asparagine biosynthesis III (tRNA-dependent): [http://metacyc.org/META/NEW-IMAGE?object=PWY490-4 PWY490-4]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
 
−
** Source: [[orthology-aragem]]
 
−
*** Tool: [[pantograph]]
 
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31064 31064]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14513 14513]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R04095 R04095]
+
** [http://www.genome.jp/dbget-bin/www_bget?R04212 R04212]
−
{{#set: direction=REVERSIBLE}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=isovaleryl-CoA dehydrogenase}}
+
{{#set: common name=Asparaginyl-tRNA Synthetase}}
−
{{#set: ec number=EC-1.3.8.4}}
+
{{#set: common name=Glutathione S-transferase, C-terminal}}
−
{{#set: gene associated=Ec-14_006780|Ec-08_006390|Ec-03_003490}}
+
{{#set: ec number=EC-6.3.5.6}}
−
{{#set: in pathway=}}
+
{{#set: gene associated=Ec-16_001810|Ec-17_000510}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: in pathway=PWY490-4}}
−
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:39, 21 March 2018

Reaction 6.3.5.6-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Asparaginyl-tRNA Synthetase
    • Glutathione S-transferase, C-terminal
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 L-glutamine[c] + 1 ATP[c] + 1 an L-aspartyl-[tRNAAsn][c] + 1 H2O[c] => 1 an L-asparaginyl-[tRNAasn][c] + 1 phosphate[c] + 1 ADP[c] + 1 L-glutamate[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY490-4, L-asparagine biosynthesis III (tRNA-dependent): PWY490-4
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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