Difference between revisions of "C4"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=MYO-INOSITOL-2-DEHYDROGENASE-RXN MYO-INOSITOL-2-DEHYDROGENASE-RXN] == * direction: ** REVERSIBLE *...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=C4 C4] == * smiles: ** CC(C)=CCCC(C)=CCCC(C)=CCCC(=CCCC(=CCCC(=CCCC(C)=CCCC(=CCCC(=CCCC(=CCCC(=...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=MYO-INOSITOL-2-DEHYDROGENASE-RXN MYO-INOSITOL-2-DEHYDROGENASE-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=C4 C4] ==
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* direction:
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* smiles:
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** REVERSIBLE
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** CC(C)=CCCC(C)=CCCC(C)=CCCC(=CCCC(=CCCC(=CCCC(C)=CCCC(=CCCC(=CCCC(=CCCC(=CCOP(OP([O-])(=O)OC1(OC(CO)C(O)C(OC(C)C(=O)NC(C)C(=O)NC(CCC(NC(CCCC[N+])C(=O)NC(C)C(NC(C(=O)[O-])C)=O)=O)C([O-])=O)C(NC(C)=O)1))([O-])=O)C)C)C)C)C)C)C
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* inchi key:
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** InChIKey=SULOOAFLXMQJSF-OGDYFQGPSA-K
 
* common name:
 
* common name:
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** oxidoreductase, NAD-binding, myo-inositol 2-dehydrogenase
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** undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine
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** Inositol 2-dehydrogenase
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* molecular weight:
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** Oxidoreductase, C-terminal
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** 1670.034   
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* ec number:
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** [http://enzyme.expasy.org/EC/1.1.1.18 EC-1.1.1.18]
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* Synonym(s):
 
* Synonym(s):
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** mur2Ac(oyl-L-Ala-γ-D-Glu-L-Lys-D-Ala-D-Ala)-diphosphoundecaprenol
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** lipid I
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[NAD]][c] '''+''' 1 [[MYO-INOSITOL]][c] '''<=>''' 1 [[CPD-14808]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADH]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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* [[RXN-8975]]
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** 1 NAD+[c] '''+''' 1 myo-inositol[c] '''<=>''' 1 scyllo-inosose[c] '''+''' 1 H+[c] '''+''' 1 NADH[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-01_006070]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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* [[Ec-07_006540]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-18_003270]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[P562-PWY]], myo-inositol degradation I: [http://metacyc.org/META/NEW-IMAGE?object=P562-PWY P562-PWY]
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** '''2''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7241]], myo-inositol degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7241 PWY-7241]
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** '''1''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-7237]], myo-, chiro- and scillo-inositol degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7237 PWY-7237]
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** '''2''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-5940]], streptomycin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5940 PWY-5940]
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** '''2''' reactions found over '''18''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* PUBCHEM:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16949 16949]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=46878496 46878496]
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* LIGAND-RXN:
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* CHEBI:
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** [http://www.genome.jp/dbget-bin/www_bget?R01183 R01183]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=60032 60032]
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* UNIPROT:
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/P26935 P26935]
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** [http://www.genome.jp/dbget-bin/www_bget?C05888 C05888]
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{{#set: direction=REVERSIBLE}}
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{{#set: smiles=CC(C)=CCCC(C)=CCCC(C)=CCCC(=CCCC(=CCCC(=CCCC(C)=CCCC(=CCCC(=CCCC(=CCCC(=CCOP(OP([O-])(=O)OC1(OC(CO)C(O)C(OC(C)C(=O)NC(C)C(=O)NC(CCC(NC(CCCC[N+])C(=O)NC(C)C(NC(C(=O)[O-])C)=O)=O)C([O-])=O)C(NC(C)=O)1))([O-])=O)C)C)C)C)C)C)C}}
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{{#set: common name=oxidoreductase, NAD-binding, myo-inositol 2-dehydrogenase}}
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{{#set: inchi key=InChIKey=SULOOAFLXMQJSF-OGDYFQGPSA-K}}
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{{#set: common name=Inositol 2-dehydrogenase}}
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{{#set: common name=undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-&gamma;-D-glutamyl-L-lysyl- D-alanyl-D-alanine}}
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{{#set: common name=Oxidoreductase, C-terminal}}
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{{#set: molecular weight=1670.034    }}
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{{#set: ec number=EC-1.1.1.18}}
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{{#set: common name=mur2Ac(oyl-L-Ala-&gamma;-D-Glu-L-Lys-D-Ala-D-Ala)-diphosphoundecaprenol|lipid I}}
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{{#set: gene associated=Ec-01_006070|Ec-07_006540|Ec-18_003270}}
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{{#set: reversible reaction associated=RXN-8975}}
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{{#set: in pathway=P562-PWY|PWY-7241|PWY-7237|PWY-5940}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 20:39, 21 March 2018

Metabolite C4

  • smiles:
    • CC(C)=CCCC(C)=CCCC(C)=CCCC(=CCCC(=CCCC(=CCCC(C)=CCCC(=CCCC(=CCCC(=CCCC(=CCOP(OP([O-])(=O)OC1(OC(CO)C(O)C(OC(C)C(=O)NC(C)C(=O)NC(CCC(NC(CCCC[N+])C(=O)NC(C)C(NC(C(=O)[O-])C)=O)=O)C([O-])=O)C(NC(C)=O)1))([O-])=O)C)C)C)C)C)C)C
  • inchi key:
    • InChIKey=SULOOAFLXMQJSF-OGDYFQGPSA-K
  • common name:
    • undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine
  • molecular weight:
    • 1670.034
  • Synonym(s):
    • mur2Ac(oyl-L-Ala-γ-D-Glu-L-Lys-D-Ala-D-Ala)-diphosphoundecaprenol
    • lipid I

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"CC(C)=CCCC(C)=CCCC(C)=CCCC(=CCCC(=CCCC(=CCCC(C)=CCCC(=CCCC(=CCCC(=CCCC(=CCOP(OP([O-])(=O)OC1(OC(CO)C(O)C(OC(C)C(=O)NC(C)C(=O)NC(CCC(NC(CCCC[N+])C(=O)NC(C)C(NC(C(=O)[O-])C)=O)=O)C([O-])=O)C(NC(C)=O)1))([O-])=O)C)C)C)C)C)C)C" cannot be used as a page name in this wiki.



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