Difference between revisions of "INORGPYROPHOSPHAT-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-308 RXN0-308] == * direction: ** LEFT-TO-RIGHT * common name: ** Aminotransferase class V doma...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=INORGPYROPHOSPHAT-RXN INORGPYROPHOSPHAT-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ino...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-308 RXN0-308] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=INORGPYROPHOSPHAT-RXN INORGPYROPHOSPHAT-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Aminotransferase class V domain
+
** inorganic diphosphatase
−
** Cysteine desulfurase
+
** inorganic pyrophosphatase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.8.1.7 EC-2.8.1.7]
+
** [http://enzyme.expasy.org/EC/3.6.1.1 EC-3.6.1.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CYS]][c] '''+''' 1 [[Cysteine-Desulfurase-L-cysteine]][c] '''=>''' 1 [[L-Cysteine-Desulfurase-persulfide]][c] '''+''' 1 [[L-ALPHA-ALANINE]][c]
+
** 1 [[WATER]][c] '''+''' 1 [[PPI]][c] '''=>''' 1 [[PROTON]][c] '''+''' 2 [[Pi]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 L-cysteine[c] '''+''' 1 an [L-cysteine desulfurase]-L-cysteine[c] '''=>''' 1 an [L-cysteine desulfurase] L-cysteine persulfide[c] '''+''' 1 L-alanine[c]
+
** 1 H2O[c] '''+''' 1 diphosphate[c] '''=>''' 1 H+[c] '''+''' 2 phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-21_003740]]
+
* Gene: [[Ec-01_004120]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***EC-NUMBER
+
*** Assignment: GO-TERM
−
* [[Ec-22_000950]]
+
** Source: [[orthology-aragem]]
−
** ESILICULOSUS_GENOME
+
* Gene: [[Ec-04_003260]]
−
***EC-NUMBER
+
** Source: [[annotation-esiliculosus_genome]]
−
* [[Ec-21_005640]]
+
*** Assignment: GO-TERM
−
** ESILICULOSUS_GENOME
+
** Source: [[orthology-aragem]]
−
***EC-NUMBER
+
* Gene: [[Ec-01_011640]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-28_000170]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-26_005670]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-14_005330]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-10_002590]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-02_000870]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-18_000740]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-12_002140]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-24_002020]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY0-1021]], L-alanine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1021 PWY0-1021]
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
* [[PWY-6823]], molybdenum cofactor biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6823 PWY-6823]
 
−
** '''7''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-6891]], thiazole biosynthesis II (aerobic bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6891 PWY-6891]
 
−
** '''2''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-6892]], thiazole biosynthesis I (facultative anaerobic bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6892 PWY-6892]
 
−
** '''3''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-aragem]]
 +
*** Tool: [[pantograph]]
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24576 24576]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R07460 R07460]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00004 R00004]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P21616 P21616]
 +
** [http://www.uniprot.org/uniprot/P31414 P31414]
 +
** [http://www.uniprot.org/uniprot/P28239 P28239]
 +
** [http://www.uniprot.org/uniprot/P37980 P37980]
 +
** [http://www.uniprot.org/uniprot/P84491 P84491]
 +
** [http://www.uniprot.org/uniprot/O59570 O59570]
 +
** [http://www.uniprot.org/uniprot/Q9S941 Q9S941]
 +
** [http://www.uniprot.org/uniprot/Q9S939 Q9S939]
 +
** [http://www.uniprot.org/uniprot/Q9S936 Q9S936]
 +
** [http://www.uniprot.org/uniprot/O26363 O26363]
 +
** [http://www.uniprot.org/uniprot/Q9S940 Q9S940]
 +
** [http://www.uniprot.org/uniprot/Q9S938 Q9S938]
 +
** [http://www.uniprot.org/uniprot/Q9S937 Q9S937]
 +
** [http://www.uniprot.org/uniprot/Q9PHM9 Q9PHM9]
 +
** [http://www.uniprot.org/uniprot/Q9UY24 Q9UY24]
 +
** [http://www.uniprot.org/uniprot/Q9JVG3 Q9JVG3]
 +
** [http://www.uniprot.org/uniprot/P47593 P47593]
 +
** [http://www.uniprot.org/uniprot/Q974Y8 Q974Y8]
 +
** [http://www.uniprot.org/uniprot/O05724 O05724]
 +
** [http://www.uniprot.org/uniprot/P19514 P19514]
 +
** [http://www.uniprot.org/uniprot/P00817 P00817]
 +
** [http://www.uniprot.org/uniprot/P0A7A9 P0A7A9]
 +
** [http://www.uniprot.org/uniprot/P13998 P13998]
 +
** [http://www.uniprot.org/uniprot/P19117 P19117]
 +
** [http://www.uniprot.org/uniprot/P21216 P21216]
 +
** [http://www.uniprot.org/uniprot/Q9R5T3 Q9R5T3]
 +
** [http://www.uniprot.org/uniprot/P37981 P37981]
 +
** [http://www.uniprot.org/uniprot/Q43801 Q43801]
 +
** [http://www.uniprot.org/uniprot/Q43798 Q43798]
 +
** [http://www.uniprot.org/uniprot/Q43797 Q43797]
 +
** [http://www.uniprot.org/uniprot/P50308 P50308]
 +
** [http://www.uniprot.org/uniprot/Q43796 Q43796]
 +
** [http://www.uniprot.org/uniprot/P93409 P93409]
 +
** [http://www.uniprot.org/uniprot/Q8H616 Q8H616]
 +
** [http://www.uniprot.org/uniprot/P93410 P93410]
 +
** [http://www.uniprot.org/uniprot/P75250 P75250]
 +
** [http://www.uniprot.org/uniprot/Q49071 Q49071]
 +
** [http://www.uniprot.org/uniprot/O48556 O48556]
 +
** [http://www.uniprot.org/uniprot/O22537 O22537]
 +
** [http://www.uniprot.org/uniprot/O82793 O82793]
 +
** [http://www.uniprot.org/uniprot/O23979 O23979]
 +
** [http://www.uniprot.org/uniprot/O49949 O49949]
 +
** [http://www.uniprot.org/uniprot/Q43187 Q43187]
 +
** [http://www.uniprot.org/uniprot/O22124 O22124]
 +
** [http://www.uniprot.org/uniprot/Q42650 Q42650]
 +
** [http://www.uniprot.org/uniprot/Q42651 Q42651]
 +
** [http://www.uniprot.org/uniprot/O65151 O65151]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Aminotransferase class V domain}}
+
{{#set: common name=inorganic diphosphatase}}
−
{{#set: common name=Cysteine desulfurase}}
+
{{#set: common name=inorganic pyrophosphatase}}
−
{{#set: ec number=EC-2.8.1.7}}
+
{{#set: ec number=EC-3.6.1.1}}
−
{{#set: gene associated=Ec-21_003740|Ec-22_000950|Ec-21_005640}}
+
{{#set: gene associated=Ec-01_004120|Ec-04_003260|Ec-01_011640|Ec-28_000170|Ec-26_005670|Ec-14_005330|Ec-10_002590|Ec-02_000870|Ec-18_000740|Ec-12_002140|Ec-24_002020}}
−
{{#set: in pathway=PWY0-1021|PWY-6823|PWY-6891|PWY-6892}}
+
{{#set: in pathway=}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction source=annotation-esiliculosus_genome}}
+
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:41, 21 March 2018

Reaction INORGPYROPHOSPHAT-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • inorganic diphosphatase
    • inorganic pyrophosphatase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 diphosphate[c] => 1 H+[c] + 2 phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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