Difference between revisions of "RXN66-470"

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(Created page with "Category:Gene == Gene Ec-22_003850 == * left end position: ** 4320423 * transcription direction: ** POSITIVE * right end position: ** 4335783 * centisome position: ** 95.6...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-470 RXN66-470] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-methyl-branched fatty acy...")
 
(One intermediate revision by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Ec-22_003850 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-470 RXN66-470] ==
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* left end position:
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* direction:
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** 4320423
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** 3-methyl-branched fatty acyl-CoA 2-hydroxylase
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* right end position:
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** Phytanoyl-CoA dioxygenase
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** 4335783
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/1.14.11 EC-1.14.11]
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** 95.6724   
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* Synonym(s):
 
* Synonym(s):
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** Esi_0039_0037
 
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** Esi0039_0037
 
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** MDAR-like
 
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[1.6.5.4-RXN]]
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* With identifiers:
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** esiliculosus_genome
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** 1 [[3-Methyl-Saturated-Fatty-Acyl-CoA]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[2-OH-3-Methyl-Saturated-Fatty-Acyl-CoA]][c] '''+''' 1 [[SUC]][c]
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***go-term
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* With common name(s):
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** [[pantograph]]-[[aragem]]
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** 1 a 3-methyl-branched 2,3,4-saturated fatty acyl-CoA[c] '''+''' 1 2-oxoglutarate[c] '''+''' 1 oxygen[c] '''=>''' 1 CO2[c] '''+''' 1 a 2-hydroxy-3-methyl-branched 2,3,4-saturated fatty acyl-CoA[c] '''+''' 1 succinate[c]
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** [[pantograph]]-[[aragem]]
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== Pathways associated ==
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== Genes associated with this reaction  ==
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* [[PWY-6370]]
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-23_003040]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-22_003660]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-01_011990]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-01_001740]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways ==
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* [[PWY66-387]], fatty acid α-oxidation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-387 PWY66-387]
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** '''4''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=4320423}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=3-methyl-branched fatty acyl-CoA 2-hydroxylase}}
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{{#set: right end position=4335783}}
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{{#set: common name=Phytanoyl-CoA dioxygenase}}
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{{#set: centisome position=95.6724    }}
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{{#set: ec number=EC-1.14.11}}
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{{#set: common name=Esi_0039_0037|Esi0039_0037|MDAR-like}}
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{{#set: gene associated=Ec-23_003040|Ec-22_003660|Ec-01_011990|Ec-01_001740}}
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{{#set: reaction associated=1.6.5.4-RXN}}
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{{#set: in pathway=PWY66-387}}
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{{#set: pathway associated=PWY-6370}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:42, 21 March 2018

Reaction RXN66-470

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 3-methyl-branched fatty acyl-CoA 2-hydroxylase
    • Phytanoyl-CoA dioxygenase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY66-387, fatty acid α-oxidation II: PWY66-387
    • 4 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN66-470&oldid=28851"