Difference between revisions of "RXN-1126"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=MONOPHENOL-MONOOXYGENASE-RXN MONOPHENOL-MONOOXYGENASE-RXN] == * direction: ** LEFT-TO-RIGHT * commo...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1126 RXN-1126] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/6....")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=MONOPHENOL-MONOOXYGENASE-RXN MONOPHENOL-MONOOXYGENASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1126 RXN-1126] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** Uncharacterised domain, di-copper centre
 
−
** Tyrosinase
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.14.18.1 EC-1.14.18.1]
+
** [http://enzyme.expasy.org/EC/6.2.1.12 EC-6.2.1.12]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[TYR]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[DOPAQUINONE]][c]
+
** 1 [[CPD-676]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[CAFFEOYL-COA]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 L-tyrosine[c] '''+''' 1 oxygen[c] '''=>''' 1 H2O[c] '''+''' 1 dopaquinone[c]
+
** 1 trans-caffeate[c] '''+''' 1 coenzyme A[c] '''+''' 1 ATP[c] '''=>''' 1 trans-caffeoyl-CoA[c] '''+''' 1 AMP[c] '''+''' 1 diphosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-03_003140]]
+
* Gene: [[Ec-10_001480]]
−
** ESILICULOSUS_GENOME
+
** Source: [[orthology-aragem]]
−
***AUTOMATED-NAME-MATCH
+
* Gene: [[Ec-04_001280]]
−
* [[Ec-12_008160]]
+
** Source: [[orthology-aragem]]
−
** ESILICULOSUS_GENOME
+
−
***EC-NUMBER
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6481]], L-dopachrome biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6481 PWY-6481]
+
* [[PWY-7398]], coumarins biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7398 PWY-7398]
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''3''' reactions found over '''13''' reactions in the full pathway
 +
* [[PWY-1121]], suberin monomers biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-1121 PWY-1121]
 +
** '''6''' reactions found over '''19''' reactions in the full pathway
 +
* [[PWY-6673]], caffeoylglucarate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6673 PWY-6673]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[annotation]]
+
* Category: [[orthology]]
−
** Source: [[annotation-esiliculosus_genome]]
+
** Source: [[orthology-aragem]]
−
*** Tool: [[pathwaytools]]
+
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18117 18117]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02078 R02078]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01943 R01943]
−
* UNIPROT:
+
−
** [http://www.uniprot.org/uniprot/P06845 P06845]
+
−
** [http://www.uniprot.org/uniprot/P33180 P33180]
+
−
** [http://www.uniprot.org/uniprot/P07524 P07524]
+
−
** [http://www.uniprot.org/uniprot/Q04604 Q04604]
+
−
** [http://www.uniprot.org/uniprot/P55024 P55024]
+
−
** [http://www.uniprot.org/uniprot/Q00234 Q00234]
+
−
** [http://www.uniprot.org/uniprot/P14679 P14679]
+
−
** [http://www.uniprot.org/uniprot/P11344 P11344]
+
−
** [http://www.uniprot.org/uniprot/Q91XK0 Q91XK0]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Uncharacterised domain, di-copper centre}}
+
{{#set: ec number=EC-6.2.1.12}}
−
{{#set: common name=Tyrosinase}}
+
{{#set: gene associated=Ec-10_001480|Ec-04_001280}}
−
{{#set: ec number=EC-1.14.18.1}}
+
{{#set: in pathway=PWY-7398|PWY-1121|PWY-6673}}
−
{{#set: gene associated=Ec-03_003140|Ec-12_008160}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: in pathway=PWY-6481}}
+
{{#set: reconstruction source=orthology-aragem}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=annotation-esiliculosus_genome}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+

Latest revision as of 19:43, 21 March 2018

Reaction RXN-1126

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 trans-caffeate[c] + 1 coenzyme A[c] + 1 ATP[c] => 1 trans-caffeoyl-CoA[c] + 1 AMP[c] + 1 diphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7398, coumarins biosynthesis (engineered): PWY-7398
    • 3 reactions found over 13 reactions in the full pathway
  • PWY-1121, suberin monomers biosynthesis: PWY-1121
    • 6 reactions found over 19 reactions in the full pathway
  • PWY-6673, caffeoylglucarate biosynthesis: PWY-6673
    • 1 reactions found over 3 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-1126&oldid=28899"